Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rtl3Q6P1Y1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rtl3Q6P1Y1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtl3Q6P1Y1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rtl3Q6P1Y1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Rtl3Q6P1Y1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rtl3Q6P1Y1 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rtl3Q6P1Y1 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Gm6345-202ENSMUST00000180900 204 ntBASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Gm27000-201ENSMUST00000182943 842 ntBASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.47■□□□□ 0.39
Rtl3Q6P1Y1 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 AA414768-201ENSMUST00000121924 1257 ntBASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rtl3Q6P1Y1 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rtl3Q6P1Y1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Rtl3Q6P1Y1 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Gm7213-201ENSMUST00000215977 950 ntBASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rtl3Q6P1Y1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl3Q6P1Y1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl3Q6P1Y1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl3Q6P1Y1 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl3Q6P1Y1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl3Q6P1Y1 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl3Q6P1Y1 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl3Q6P1Y1 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl3Q6P1Y1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.44■□□□□ 0.38
Rtl3Q6P1Y1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl3Q6P1Y1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl3Q6P1Y1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl3Q6P1Y1 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl3Q6P1Y1 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl3Q6P1Y1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rtl3Q6P1Y1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rtl3Q6P1Y1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms