Protein–RNA interactions for Protein: Q6NS82

Retreg2, Reticulophagy regulator 2, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg2Q6NS82 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retreg2Q6NS82 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Retreg2Q6NS82 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Retreg2Q6NS82 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg2Q6NS82 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg2Q6NS82 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg2Q6NS82 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg2Q6NS82 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg2Q6NS82 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Retreg2Q6NS82 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg2Q6NS82 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Retreg2Q6NS82 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg2Q6NS82 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg2Q6NS82 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retreg2Q6NS82 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg2Q6NS82 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.2■□□□□ 0.5
Retreg2Q6NS82 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg2Q6NS82 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg2Q6NS82 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.2■□□□□ 0.5
Retreg2Q6NS82 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg2Q6NS82 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg2Q6NS82 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg2Q6NS82 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Retreg2Q6NS82 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg2Q6NS82 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg2Q6NS82 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Retreg2Q6NS82 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Retreg2Q6NS82 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg2Q6NS82 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg2Q6NS82 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retreg2Q6NS82 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retreg2Q6NS82 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg2Q6NS82 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg2Q6NS82 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg2Q6NS82 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg2Q6NS82 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg2Q6NS82 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg2Q6NS82 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC18.18■□□□□ 0.5
Retreg2Q6NS82 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.18■□□□□ 0.5
Retreg2Q6NS82 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg2Q6NS82 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg2Q6NS82 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg2Q6NS82 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg2Q6NS82 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg2Q6NS82 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg2Q6NS82 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg2Q6NS82 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg2Q6NS82 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retreg2Q6NS82 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Gm13401-201ENSMUST00000117074 291 ntBASIC18.17■□□□□ 0.5
Retreg2Q6NS82 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Gm38027-201ENSMUST00000192315 235 ntBASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Haglr-201ENSMUST00000100000 2085 ntBASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.17■□□□□ 0.5
Retreg2Q6NS82 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Retreg2Q6NS82 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Retreg2Q6NS82 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Retreg2Q6NS82 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms