Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ss18Q62280 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ss18Q62280 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ss18Q62280 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC12.52□□□□□ -0.4
Ss18Q62280 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Ss18Q62280 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ss18Q62280 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Ss18Q62280 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Ss18Q62280 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ss18Q62280 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ss18Q62280 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Ss18Q62280 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ss18Q62280 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ss18Q62280 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ss18Q62280 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ss18Q62280 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ss18Q62280 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.52□□□□□ -0.41
Ss18Q62280 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ss18Q62280 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ss18Q62280 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ss18Q62280 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.52□□□□□ -0.41
Ss18Q62280 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Ss18Q62280 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ss18Q62280 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ss18Q62280 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ss18Q62280 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ss18Q62280 Hivep3-201ENSMUST00000084306 2973 ntBASIC12.52□□□□□ -0.41
Ss18Q62280 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ss18Q62280 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ss18Q62280 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ss18Q62280 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ss18Q62280 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ss18Q62280 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ss18Q62280 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ss18Q62280 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
Ss18Q62280 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ss18Q62280 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ss18Q62280 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.51□□□□□ -0.41
Ss18Q62280 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ss18Q62280 Mir6349-201ENSMUST00000184059 97 ntBASIC12.51□□□□□ -0.41
Ss18Q62280 Gm10138-203ENSMUST00000206952 366 ntBASIC12.51□□□□□ -0.41
Ss18Q62280 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.51□□□□□ -0.41
Ss18Q62280 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.51□□□□□ -0.41
Ss18Q62280 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ss18Q62280 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.51□□□□□ -0.41
Ss18Q62280 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ss18Q62280 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ss18Q62280 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ss18Q62280 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Ss18Q62280 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ss18Q62280 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ss18Q62280 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ss18Q62280 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ss18Q62280 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ss18Q62280 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ss18Q62280 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC12.5□□□□□ -0.41
Ss18Q62280 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ss18Q62280 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ss18Q62280 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ss18Q62280 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ss18Q62280 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ss18Q62280 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ss18Q62280 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ss18Q62280 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ss18Q62280 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ss18Q62280 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ss18Q62280 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Ss18Q62280 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ss18Q62280 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ss18Q62280 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ss18Q62280 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ss18Q62280 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ss18Q62280 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ss18Q62280 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ss18Q62280 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ss18Q62280 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ss18Q62280 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC12.49□□□□□ -0.41
Ss18Q62280 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ss18Q62280 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.49□□□□□ -0.41
Ss18Q62280 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ss18Q62280 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ss18Q62280 Mir2861-201ENSMUST00000175539 82 ntBASIC12.49□□□□□ -0.41
Ss18Q62280 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ss18Q62280 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ss18Q62280 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ss18Q62280 Mtag2-201ENSMUST00000058665 714 ntBASIC12.49□□□□□ -0.41
Ss18Q62280 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Ss18Q62280 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Ss18Q62280 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Ss18Q62280 Dancr-204ENSMUST00000132389 2347 ntBASIC12.49□□□□□ -0.41
Ss18Q62280 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.49□□□□□ -0.41
Ss18Q62280 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ss18Q62280 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ss18Q62280 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ss18Q62280 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ss18Q62280 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ss18Q62280 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ss18Q62280 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Ss18Q62280 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Ss18Q62280 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms