Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VcanQ62059 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VcanQ62059 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VcanQ62059 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VcanQ62059 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.86■□□□□ 0.13
VcanQ62059 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
VcanQ62059 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VcanQ62059 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VcanQ62059 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
VcanQ62059 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
VcanQ62059 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
VcanQ62059 Gm6089-201ENSMUST00000197666 938 ntBASIC15.86■□□□□ 0.13
VcanQ62059 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.86■□□□□ 0.13
VcanQ62059 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
VcanQ62059 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VcanQ62059 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VcanQ62059 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.85■□□□□ 0.13
VcanQ62059 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VcanQ62059 Idnk-204ENSMUST00000226010 1898 ntBASIC15.85■□□□□ 0.13
VcanQ62059 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.85■□□□□ 0.13
VcanQ62059 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VcanQ62059 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.85■□□□□ 0.13
VcanQ62059 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VcanQ62059 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VcanQ62059 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.85■□□□□ 0.13
VcanQ62059 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VcanQ62059 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VcanQ62059 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
VcanQ62059 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
VcanQ62059 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VcanQ62059 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
VcanQ62059 Gm27628-201ENSMUST00000184911 107 ntBASIC15.85■□□□□ 0.13
VcanQ62059 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC15.85■□□□□ 0.13
VcanQ62059 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VcanQ62059 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VcanQ62059 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VcanQ62059 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
VcanQ62059 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
VcanQ62059 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
VcanQ62059 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
VcanQ62059 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
VcanQ62059 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
VcanQ62059 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VcanQ62059 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VcanQ62059 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.84■□□□□ 0.13
VcanQ62059 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
VcanQ62059 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VcanQ62059 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VcanQ62059 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.84■□□□□ 0.13
VcanQ62059 AV026068-213ENSMUST00000223675 1171 ntBASIC15.84■□□□□ 0.13
VcanQ62059 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
VcanQ62059 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VcanQ62059 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VcanQ62059 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VcanQ62059 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
VcanQ62059 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VcanQ62059 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VcanQ62059 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VcanQ62059 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VcanQ62059 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.84■□□□□ 0.13
VcanQ62059 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VcanQ62059 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
VcanQ62059 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
VcanQ62059 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
VcanQ62059 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
VcanQ62059 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
VcanQ62059 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.83■□□□□ 0.13
VcanQ62059 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.83■□□□□ 0.13
VcanQ62059 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
VcanQ62059 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VcanQ62059 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VcanQ62059 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
VcanQ62059 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC15.83■□□□□ 0.12
VcanQ62059 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
VcanQ62059 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VcanQ62059 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
VcanQ62059 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VcanQ62059 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VcanQ62059 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
VcanQ62059 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
VcanQ62059 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.83■□□□□ 0.12
VcanQ62059 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
VcanQ62059 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VcanQ62059 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VcanQ62059 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VcanQ62059 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
VcanQ62059 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VcanQ62059 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.82■□□□□ 0.12
VcanQ62059 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.82■□□□□ 0.12
VcanQ62059 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VcanQ62059 Mir6977-201ENSMUST00000184960 64 ntBASIC15.82■□□□□ 0.12
VcanQ62059 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VcanQ62059 Phf7-203ENSMUST00000226565 1971 ntBASIC15.82■□□□□ 0.12
VcanQ62059 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VcanQ62059 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
VcanQ62059 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VcanQ62059 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
VcanQ62059 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
VcanQ62059 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
VcanQ62059 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms