Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC12.43□□□□□ -0.42
Foxc1Q61572 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Gm37319-201ENSMUST00000193500 636 ntBASIC12.43□□□□□ -0.42
Foxc1Q61572 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.43□□□□□ -0.42
Foxc1Q61572 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Foxc1Q61572 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxc1Q61572 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.42□□□□□ -0.42
Foxc1Q61572 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Foxc1Q61572 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Foxc1Q61572 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Foxc1Q61572 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxc1Q61572 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxc1Q61572 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.42□□□□□ -0.42
Foxc1Q61572 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxc1Q61572 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxc1Q61572 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC12.42□□□□□ -0.42
Foxc1Q61572 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.42□□□□□ -0.42
Foxc1Q61572 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Foxc1Q61572 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Foxc1Q61572 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Foxc1Q61572 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxc1Q61572 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxc1Q61572 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxc1Q61572 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxc1Q61572 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxc1Q61572 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxc1Q61572 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxc1Q61572 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Foxc1Q61572 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Foxc1Q61572 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Foxc1Q61572 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Foxc1Q61572 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Foxc1Q61572 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Gm21814-202ENSMUST00000203277 873 ntBASIC12.41□□□□□ -0.42
Foxc1Q61572 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Foxc1Q61572 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Foxc1Q61572 Gm15743-202ENSMUST00000182690 1901 ntBASIC12.41□□□□□ -0.42
Foxc1Q61572 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Foxc1Q61572 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxc1Q61572 Gm45251-201ENSMUST00000209486 1465 ntBASIC12.4□□□□□ -0.42
Foxc1Q61572 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Foxc1Q61572 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxc1Q61572 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Foxc1Q61572 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Foxc1Q61572 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxc1Q61572 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxc1Q61572 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxc1Q61572 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Foxc1Q61572 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxc1Q61572 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxc1Q61572 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxc1Q61572 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxc1Q61572 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.4□□□□□ -0.42
Foxc1Q61572 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC12.4□□□□□ -0.42
Foxc1Q61572 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxc1Q61572 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxc1Q61572 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxc1Q61572 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.4□□□□□ -0.42
Foxc1Q61572 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Foxc1Q61572 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Foxc1Q61572 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Foxc1Q61572 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Foxc1Q61572 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Foxc1Q61572 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.43
Foxc1Q61572 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxc1Q61572 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxc1Q61572 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms