Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Smarcd1Q61466 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Smarcd1Q61466 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd1Q61466 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Smarcd1Q61466 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd1Q61466 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd1Q61466 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd1Q61466 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd1Q61466 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd1Q61466 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd1Q61466 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Smarcd1Q61466 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd1Q61466 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd1Q61466 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.63■□□□□ 0.41
Smarcd1Q61466 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.63■□□□□ 0.41
Smarcd1Q61466 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd1Q61466 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.63■□□□□ 0.41
Smarcd1Q61466 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Smarcd1Q61466 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd1Q61466 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd1Q61466 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Smarcd1Q61466 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd1Q61466 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd1Q61466 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd1Q61466 Gm37722-201ENSMUST00000193757 208 ntBASIC17.62■□□□□ 0.41
Smarcd1Q61466 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.62■□□□□ 0.41
Smarcd1Q61466 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd1Q61466 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd1Q61466 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.62■□□□□ 0.41
Smarcd1Q61466 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd1Q61466 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd1Q61466 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd1Q61466 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.62■□□□□ 0.41
Smarcd1Q61466 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd1Q61466 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.62■□□□□ 0.41
Smarcd1Q61466 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd1Q61466 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.62■□□□□ 0.41
Smarcd1Q61466 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd1Q61466 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd1Q61466 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Smarcd1Q61466 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Smarcd1Q61466 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd1Q61466 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.61■□□□□ 0.41
Smarcd1Q61466 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd1Q61466 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Smarcd1Q61466 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
Smarcd1Q61466 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd1Q61466 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.61■□□□□ 0.41
Smarcd1Q61466 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd1Q61466 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.61■□□□□ 0.41
Smarcd1Q61466 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd1Q61466 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd1Q61466 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd1Q61466 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.61■□□□□ 0.41
Smarcd1Q61466 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd1Q61466 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd1Q61466 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Smarcd1Q61466 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd1Q61466 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd1Q61466 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Smarcd1Q61466 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.6■□□□□ 0.41
Smarcd1Q61466 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd1Q61466 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd1Q61466 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd1Q61466 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.6■□□□□ 0.41
Smarcd1Q61466 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd1Q61466 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.6■□□□□ 0.41
Smarcd1Q61466 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.6■□□□□ 0.41
Smarcd1Q61466 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.6■□□□□ 0.41
Smarcd1Q61466 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd1Q61466 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd1Q61466 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd1Q61466 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd1Q61466 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd1Q61466 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd1Q61466 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.6■□□□□ 0.41
Smarcd1Q61466 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd1Q61466 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd1Q61466 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd1Q61466 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd1Q61466 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Smarcd1Q61466 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms