Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ubr3Q5U430 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC20.54■□□□□ 0.88
Ubr3Q5U430 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr3Q5U430 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr3Q5U430 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr3Q5U430 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr3Q5U430 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr3Q5U430 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.53■□□□□ 0.88
Ubr3Q5U430 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC20.53■□□□□ 0.88
Ubr3Q5U430 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr3Q5U430 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr3Q5U430 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ubr3Q5U430 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Ubr3Q5U430 Gm27397-201ENSMUST00000184997 107 ntBASIC20.53■□□□□ 0.88
Ubr3Q5U430 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC20.53■□□□□ 0.88
Ubr3Q5U430 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ubr3Q5U430 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr3Q5U430 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr3Q5U430 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubr3Q5U430 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ubr3Q5U430 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
Ubr3Q5U430 Gm11780-201ENSMUST00000136880 516 ntBASIC20.52■□□□□ 0.88
Ubr3Q5U430 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.52■□□□□ 0.88
Ubr3Q5U430 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr3Q5U430 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ubr3Q5U430 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr3Q5U430 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr3Q5U430 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr3Q5U430 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr3Q5U430 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubr3Q5U430 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ubr3Q5U430 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Ubr3Q5U430 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC20.52■□□□□ 0.87
Ubr3Q5U430 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Ubr3Q5U430 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr3Q5U430 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr3Q5U430 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Ubr3Q5U430 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr3Q5U430 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr3Q5U430 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr3Q5U430 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ubr3Q5U430 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ubr3Q5U430 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr3Q5U430 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC20.51■□□□□ 0.87
Ubr3Q5U430 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ubr3Q5U430 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr3Q5U430 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr3Q5U430 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr3Q5U430 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr3Q5U430 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubr3Q5U430 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr3Q5U430 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20.5■□□□□ 0.87
Ubr3Q5U430 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr3Q5U430 AC114585.2-202ENSMUST00000228094 426 ntBASIC20.5■□□□□ 0.87
Ubr3Q5U430 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr3Q5U430 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr3Q5U430 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ubr3Q5U430 Gm45203-201ENSMUST00000206384 1831 ntBASIC20.5■□□□□ 0.87
Ubr3Q5U430 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr3Q5U430 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC20.5■□□□□ 0.87
Ubr3Q5U430 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr3Q5U430 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubr3Q5U430 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC20.5■□□□□ 0.87
Ubr3Q5U430 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr3Q5U430 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr3Q5U430 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr3Q5U430 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr3Q5U430 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC20.49■□□□□ 0.87
Ubr3Q5U430 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.49■□□□□ 0.87
Ubr3Q5U430 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr3Q5U430 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr3Q5U430 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr3Q5U430 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr3Q5U430 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr3Q5U430 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr3Q5U430 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ubr3Q5U430 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubr3Q5U430 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr3Q5U430 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.48■□□□□ 0.87
Ubr3Q5U430 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC20.48■□□□□ 0.87
Ubr3Q5U430 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.48■□□□□ 0.87
Ubr3Q5U430 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr3Q5U430 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr3Q5U430 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr3Q5U430 Grk6-206ENSMUST00000224995 2971 ntBASIC20.48■□□□□ 0.87
Ubr3Q5U430 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ubr3Q5U430 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr3Q5U430 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr3Q5U430 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr3Q5U430 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubr3Q5U430 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr3Q5U430 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.47■□□□□ 0.87
Ubr3Q5U430 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC20.47■□□□□ 0.87
Ubr3Q5U430 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr3Q5U430 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr3Q5U430 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr3Q5U430 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr3Q5U430 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr3Q5U430 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubr3Q5U430 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms