Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav2Q5R1I9 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav2Q5R1I9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.25
Trav2Q5R1I9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav2Q5R1I9 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Gm9013-201ENSMUST00000132939 882 ntBASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav2Q5R1I9 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Gm11355-201ENSMUST00000121120 306 ntBASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav2Q5R1I9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Gm26039-201ENSMUST00000158152 144 ntBASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Gm6345-202ENSMUST00000180900 204 ntBASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Gm7367-201ENSMUST00000057611 492 ntBASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trav2Q5R1I9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Gm33142-201ENSMUST00000193913 867 ntBASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Gm21362-201ENSMUST00000194272 928 ntBASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav2Q5R1I9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms