Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Gm15039-201ENSMUST00000118914 875 ntBASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Gm18666-201ENSMUST00000190039 958 ntBASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 AC166341.7-201ENSMUST00000221698 126 ntBASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav7d-3Q5R1I1 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav7d-3Q5R1I1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav7d-3Q5R1I1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Trav7d-3Q5R1I1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav7d-3Q5R1I1 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav7d-3Q5R1I1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav7d-3Q5R1I1 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav7d-3Q5R1I1 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav7d-3Q5R1I1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav7d-3Q5R1I1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav7d-3Q5R1I1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Trav7d-3Q5R1I1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.46□□□□□ -0.42
Trav7d-3Q5R1I1 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav7d-3Q5R1I1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Gm18025-201ENSMUST00000221733 862 ntBASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav7d-3Q5R1I1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Gm12441-201ENSMUST00000121806 588 ntBASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav7d-3Q5R1I1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms