Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-4Q5R1I0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-4Q5R1I0 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-4Q5R1I0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-4Q5R1I0 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-4Q5R1I0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav6d-4Q5R1I0 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-4Q5R1I0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav6d-4Q5R1I0 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Gm11355-201ENSMUST00000121120 306 ntBASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav6d-4Q5R1I0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6d-4Q5R1I0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6d-4Q5R1I0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6d-4Q5R1I0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav6d-4Q5R1I0 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav6d-4Q5R1I0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Gm9013-201ENSMUST00000132939 882 ntBASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Gm6345-202ENSMUST00000180900 204 ntBASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trav6d-4Q5R1I0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trav6d-4Q5R1I0 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms