Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Gm17661-201ENSMUST00000170317 270 ntBASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5d-4Q5R1F6 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5d-4Q5R1F6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5d-4Q5R1F6 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5d-4Q5R1F6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5d-4Q5R1F6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5d-4Q5R1F6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5d-4Q5R1F6 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.52□□□□□ -0.08
Trav5d-4Q5R1F6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5d-4Q5R1F6 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trav5d-4Q5R1F6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5d-4Q5R1F6 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5d-4Q5R1F6 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trav5d-4Q5R1F6 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5d-4Q5R1F6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5d-4Q5R1F6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 Gm38027-201ENSMUST00000192315 235 ntBASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 Gm10812-201ENSMUST00000099864 546 ntBASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5d-4Q5R1F6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trav5d-4Q5R1F6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Gm715-201ENSMUST00000117865 831 ntBASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Gm7638-201ENSMUST00000121348 967 ntBASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Timm23-208ENSMUST00000226683 750 ntBASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav5d-4Q5R1F6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms