Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Gm29241-201ENSMUST00000189260 1096 ntBASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 AC099934.2-201ENSMUST00000196389 70 ntBASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 AC156953.1-201ENSMUST00000196953 70 ntBASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 AC157822.2-201ENSMUST00000200291 70 ntBASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Gm44549-201ENSMUST00000208351 577 ntBASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15-1-dv6-1Q5R1D2 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms