Protein–RNA interactions for Protein: Q5NCP0

Rnf43, E3 ubiquitin-protein ligase RNF43, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf43Q5NCP0 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rnf43Q5NCP0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rnf43Q5NCP0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf43Q5NCP0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf43Q5NCP0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf43Q5NCP0 Gm13186-201ENSMUST00000118031 316 ntBASIC17.17■□□□□ 0.34
Rnf43Q5NCP0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.17■□□□□ 0.34
Rnf43Q5NCP0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Rnf43Q5NCP0 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rnf43Q5NCP0 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.17■□□□□ 0.34
Rnf43Q5NCP0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf43Q5NCP0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf43Q5NCP0 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rnf43Q5NCP0 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rnf43Q5NCP0 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf43Q5NCP0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf43Q5NCP0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rnf43Q5NCP0 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Gm27000-201ENSMUST00000182943 842 ntBASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rnf43Q5NCP0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Rnf43Q5NCP0 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Rnf43Q5NCP0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Rnf43Q5NCP0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms