Protein–RNA interactions for Protein: Q5M6W3

Clhc1, Clathrin heavy chain linker domain-containing protein 1, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clhc1Q5M6W3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Clhc1Q5M6W3 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Gm29257-201ENSMUST00000186115 639 ntBASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Clhc1Q5M6W3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clhc1Q5M6W3 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Clhc1Q5M6W3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Clhc1Q5M6W3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Clhc1Q5M6W3 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Clhc1Q5M6W3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.32■□□□□ 0.2
Clhc1Q5M6W3 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms