Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trpm3Q5F4S9 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trpm3Q5F4S9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Trpm3Q5F4S9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Gm43347-201ENSMUST00000200226 580 ntBASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Trpm3Q5F4S9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trpm3Q5F4S9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trpm3Q5F4S9 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trpm3Q5F4S9 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
Trpm3Q5F4S9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trpm3Q5F4S9 Rprl3-201ENSMUST00000157400 290 ntBASIC21.37■■□□□ 1.01
Trpm3Q5F4S9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC21.37■■□□□ 1.01
Trpm3Q5F4S9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC21.37■■□□□ 1.01
Trpm3Q5F4S9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC21.37■■□□□ 1.01
Trpm3Q5F4S9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC21.37■■□□□ 1.01
Trpm3Q5F4S9 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Trpm3Q5F4S9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trpm3Q5F4S9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Trpm3Q5F4S9 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Trpm3Q5F4S9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Trpm3Q5F4S9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC21.36■■□□□ 1.01
Trpm3Q5F4S9 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trpm3Q5F4S9 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trpm3Q5F4S9 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trpm3Q5F4S9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trpm3Q5F4S9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trpm3Q5F4S9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trpm3Q5F4S9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Trpm3Q5F4S9 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Trpm3Q5F4S9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Trpm3Q5F4S9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
Trpm3Q5F4S9 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trpm3Q5F4S9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
Trpm3Q5F4S9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Trpm3Q5F4S9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Trpm3Q5F4S9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Trpm3Q5F4S9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trpm3Q5F4S9 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC21.35■■□□□ 1.01
Trpm3Q5F4S9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trpm3Q5F4S9 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trpm3Q5F4S9 Gm18733-201ENSMUST00000173950 856 ntBASIC21.35■■□□□ 1.01
Trpm3Q5F4S9 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trpm3Q5F4S9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC21.35■■□□□ 1.01
Trpm3Q5F4S9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC21.35■■□□□ 1.01
Trpm3Q5F4S9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trpm3Q5F4S9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Trpm3Q5F4S9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Trpm3Q5F4S9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trpm3Q5F4S9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Trpm3Q5F4S9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trpm3Q5F4S9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Trpm3Q5F4S9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC21.35■■□□□ 1.01
Trpm3Q5F4S9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC21.35■■□□□ 1.01
Trpm3Q5F4S9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trpm3Q5F4S9 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trpm3Q5F4S9 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trpm3Q5F4S9 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Trpm3Q5F4S9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trpm3Q5F4S9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Trpm3Q5F4S9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
Trpm3Q5F4S9 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trpm3Q5F4S9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Trpm3Q5F4S9 Gm5864-201ENSMUST00000202263 970 ntBASIC21.34■■□□□ 1.01
Trpm3Q5F4S9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Trpm3Q5F4S9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC21.34■■□□□ 1.01
Trpm3Q5F4S9 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trpm3Q5F4S9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trpm3Q5F4S9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trpm3Q5F4S9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Trpm3Q5F4S9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trpm3Q5F4S9 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trpm3Q5F4S9 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trpm3Q5F4S9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Trpm3Q5F4S9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trpm3Q5F4S9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trpm3Q5F4S9 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Trpm3Q5F4S9 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Trpm3Q5F4S9 Gm11841-201ENSMUST00000117060 1963 ntBASIC21.33■■□□□ 1
Trpm3Q5F4S9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Trpm3Q5F4S9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms