Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC20.14■□□□□ 0.81
Rnf20Q5DTM8 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Gm27000-201ENSMUST00000182943 842 ntBASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Gm27463-201ENSMUST00000183569 57 ntBASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC20.13■□□□□ 0.81
Rnf20Q5DTM8 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf20Q5DTM8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf20Q5DTM8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf20Q5DTM8 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.12■□□□□ 0.81
Rnf20Q5DTM8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.12■□□□□ 0.81
Rnf20Q5DTM8 Gm18958-201ENSMUST00000174258 762 ntBASIC20.12■□□□□ 0.81
Rnf20Q5DTM8 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf20Q5DTM8 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf20Q5DTM8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Rnf20Q5DTM8 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf20Q5DTM8 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf20Q5DTM8 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf20Q5DTM8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf20Q5DTM8 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Rnf20Q5DTM8 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf20Q5DTM8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf20Q5DTM8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Rnf20Q5DTM8 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf20Q5DTM8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf20Q5DTM8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf20Q5DTM8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf20Q5DTM8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf20Q5DTM8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.11■□□□□ 0.81
Rnf20Q5DTM8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Rnf20Q5DTM8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.11■□□□□ 0.81
Rnf20Q5DTM8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf20Q5DTM8 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.11■□□□□ 0.81
Rnf20Q5DTM8 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf20Q5DTM8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf20Q5DTM8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf20Q5DTM8 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf20Q5DTM8 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf20Q5DTM8 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf20Q5DTM8 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf20Q5DTM8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf20Q5DTM8 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf20Q5DTM8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Rnf20Q5DTM8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf20Q5DTM8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf20Q5DTM8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf20Q5DTM8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC20.08■□□□□ 0.81
Rnf20Q5DTM8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms