Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2bQ56A07 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2bQ56A07 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2bQ56A07 Gm37292-201ENSMUST00000192062 758 ntBASIC16.75■□□□□ 0.27
Scn2bQ56A07 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2bQ56A07 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2bQ56A07 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2bQ56A07 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2bQ56A07 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Scn2bQ56A07 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2bQ56A07 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Scn2bQ56A07 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2bQ56A07 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2bQ56A07 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2bQ56A07 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.75■□□□□ 0.27
Scn2bQ56A07 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2bQ56A07 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Scn2bQ56A07 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2bQ56A07 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2bQ56A07 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2bQ56A07 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2bQ56A07 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2bQ56A07 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2bQ56A07 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2bQ56A07 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2bQ56A07 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2bQ56A07 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.74■□□□□ 0.27
Scn2bQ56A07 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.74■□□□□ 0.27
Scn2bQ56A07 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2bQ56A07 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2bQ56A07 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2bQ56A07 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Scn2bQ56A07 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2bQ56A07 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2bQ56A07 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Scn2bQ56A07 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2bQ56A07 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2bQ56A07 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2bQ56A07 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2bQ56A07 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC16.73■□□□□ 0.27
Scn2bQ56A07 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2bQ56A07 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2bQ56A07 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2bQ56A07 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2bQ56A07 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.73■□□□□ 0.27
Scn2bQ56A07 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.73■□□□□ 0.27
Scn2bQ56A07 Gm10698-201ENSMUST00000182663 604 ntBASIC16.73■□□□□ 0.27
Scn2bQ56A07 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.73■□□□□ 0.27
Scn2bQ56A07 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2bQ56A07 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Scn2bQ56A07 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2bQ56A07 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2bQ56A07 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2bQ56A07 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2bQ56A07 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2bQ56A07 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Scn2bQ56A07 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2bQ56A07 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2bQ56A07 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2bQ56A07 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2bQ56A07 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2bQ56A07 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2bQ56A07 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.72■□□□□ 0.27
Scn2bQ56A07 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.72■□□□□ 0.27
Scn2bQ56A07 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2bQ56A07 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.72■□□□□ 0.27
Scn2bQ56A07 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2bQ56A07 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2bQ56A07 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2bQ56A07 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2bQ56A07 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2bQ56A07 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Scn2bQ56A07 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Scn2bQ56A07 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn2bQ56A07 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn2bQ56A07 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn2bQ56A07 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Scn2bQ56A07 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.71■□□□□ 0.27
Scn2bQ56A07 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.71■□□□□ 0.27
Scn2bQ56A07 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn2bQ56A07 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn2bQ56A07 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn2bQ56A07 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn2bQ56A07 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Scn2bQ56A07 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.7■□□□□ 0.26
Scn2bQ56A07 Gm4974-201ENSMUST00000209974 875 ntBASIC16.7■□□□□ 0.26
Scn2bQ56A07 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms