Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rc3h1Q4VGL6 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rc3h1Q4VGL6 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rc3h1Q4VGL6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rc3h1Q4VGL6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rc3h1Q4VGL6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.52■□□□□ 0.72
Rc3h1Q4VGL6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rc3h1Q4VGL6 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rc3h1Q4VGL6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rc3h1Q4VGL6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.52■□□□□ 0.72
Rc3h1Q4VGL6 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rc3h1Q4VGL6 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rc3h1Q4VGL6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC19.52■□□□□ 0.72
Rc3h1Q4VGL6 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.52■□□□□ 0.72
Rc3h1Q4VGL6 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rc3h1Q4VGL6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rc3h1Q4VGL6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.52■□□□□ 0.71
Rc3h1Q4VGL6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Rc3h1Q4VGL6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.51■□□□□ 0.71
Rc3h1Q4VGL6 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Rc3h1Q4VGL6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rc3h1Q4VGL6 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rc3h1Q4VGL6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rc3h1Q4VGL6 Olfr129-201ENSMUST00000122318 993 ntBASIC19.51■□□□□ 0.71
Rc3h1Q4VGL6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Rc3h1Q4VGL6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Rc3h1Q4VGL6 Gm44450-201ENSMUST00000199528 114 ntBASIC19.51■□□□□ 0.71
Rc3h1Q4VGL6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rc3h1Q4VGL6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rc3h1Q4VGL6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rc3h1Q4VGL6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Rc3h1Q4VGL6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rc3h1Q4VGL6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Gm27742-201ENSMUST00000184667 60 ntBASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rc3h1Q4VGL6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rc3h1Q4VGL6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.49■□□□□ 0.71
Rc3h1Q4VGL6 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.49■□□□□ 0.71
Rc3h1Q4VGL6 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rc3h1Q4VGL6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Rc3h1Q4VGL6 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rc3h1Q4VGL6 Gm18115-201ENSMUST00000221209 621 ntBASIC19.49■□□□□ 0.71
Rc3h1Q4VGL6 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rc3h1Q4VGL6 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rc3h1Q4VGL6 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rc3h1Q4VGL6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rc3h1Q4VGL6 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rc3h1Q4VGL6 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC19.49■□□□□ 0.71
Rc3h1Q4VGL6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Gm28033-201ENSMUST00000184224 96 ntBASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Gm17807-201ENSMUST00000186869 298 ntBASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rc3h1Q4VGL6 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Gm15794-201ENSMUST00000120182 631 ntBASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Gm45328-201ENSMUST00000210942 917 ntBASIC19.47■□□□□ 0.71
Rc3h1Q4VGL6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms