Protein–RNA interactions for Protein: Q3URI6

Zfp560, Zinc finger protein 560, mousemouse

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp560Q3URI6 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Zfp560Q3URI6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Zfp560Q3URI6 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Zfp560Q3URI6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Zfp560Q3URI6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Zfp560Q3URI6 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Zfp560Q3URI6 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Zfp560Q3URI6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Zfp560Q3URI6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Zfp560Q3URI6 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zfp560Q3URI6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.96■□□□□ 0.31
Zfp560Q3URI6 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Zfp560Q3URI6 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Zfp560Q3URI6 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.96■□□□□ 0.31
Zfp560Q3URI6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Zfp560Q3URI6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Zfp560Q3URI6 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zfp560Q3URI6 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Zfp560Q3URI6 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Zfp560Q3URI6 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zfp560Q3URI6 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zfp560Q3URI6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zfp560Q3URI6 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zfp560Q3URI6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Zfp560Q3URI6 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Zfp560Q3URI6 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Zfp560Q3URI6 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Zfp560Q3URI6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Zfp560Q3URI6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Zfp560Q3URI6 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Zfp560Q3URI6 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Gm6433-201ENSMUST00000118634 875 ntBASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Gm27000-201ENSMUST00000182943 842 ntBASIC16.95■□□□□ 0.3
Zfp560Q3URI6 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Zfp560Q3URI6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Zfp560Q3URI6 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Gm16061-201ENSMUST00000122167 857 ntBASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.93■□□□□ 0.3
Zfp560Q3URI6 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Gm18959-201ENSMUST00000208954 655 ntBASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Zfp560Q3URI6 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms