Protein–RNA interactions for Protein: Q3UP38

Cracr2a, EF-hand calcium-binding domain-containing protein 4B, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cracr2aQ3UP38 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.43■□□□□ 0.54
Cracr2aQ3UP38 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cracr2aQ3UP38 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cracr2aQ3UP38 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cracr2aQ3UP38 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.43■□□□□ 0.54
Cracr2aQ3UP38 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cracr2aQ3UP38 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cracr2aQ3UP38 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cracr2aQ3UP38 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cracr2aQ3UP38 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cracr2aQ3UP38 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cracr2aQ3UP38 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cracr2aQ3UP38 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cracr2aQ3UP38 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cracr2aQ3UP38 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cracr2aQ3UP38 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cracr2aQ3UP38 Haglr-201ENSMUST00000100000 2085 ntBASIC18.42■□□□□ 0.54
Cracr2aQ3UP38 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cracr2aQ3UP38 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cracr2aQ3UP38 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.42■□□□□ 0.54
Cracr2aQ3UP38 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Cracr2aQ3UP38 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.42■□□□□ 0.54
Cracr2aQ3UP38 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cracr2aQ3UP38 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cracr2aQ3UP38 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cracr2aQ3UP38 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cracr2aQ3UP38 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cracr2aQ3UP38 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cracr2aQ3UP38 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cracr2aQ3UP38 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 Gm7977-201ENSMUST00000193787 748 ntBASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cracr2aQ3UP38 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cracr2aQ3UP38 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cracr2aQ3UP38 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cracr2aQ3UP38 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cracr2aQ3UP38 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.39■□□□□ 0.53
Cracr2aQ3UP38 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cracr2aQ3UP38 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.39■□□□□ 0.53
Cracr2aQ3UP38 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.39■□□□□ 0.53
Cracr2aQ3UP38 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cracr2aQ3UP38 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cracr2aQ3UP38 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cracr2aQ3UP38 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cracr2aQ3UP38 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cracr2aQ3UP38 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cracr2aQ3UP38 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.39■□□□□ 0.53
Cracr2aQ3UP38 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cracr2aQ3UP38 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cracr2aQ3UP38 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cracr2aQ3UP38 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cracr2aQ3UP38 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms