Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cks1brtQ3UNC9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Gm44544-201ENSMUST00000207052 1844 ntBASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cks1brtQ3UNC9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Gm7417-201ENSMUST00000192950 473 ntBASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cks1brtQ3UNC9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Gm5921-201ENSMUST00000075898 882 ntBASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Cks1brtQ3UNC9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cks1brtQ3UNC9 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms