Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Naf1Q3UMQ8 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Naf1Q3UMQ8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Naf1Q3UMQ8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Naf1Q3UMQ8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Naf1Q3UMQ8 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Naf1Q3UMQ8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Naf1Q3UMQ8 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Naf1Q3UMQ8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Naf1Q3UMQ8 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Naf1Q3UMQ8 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Naf1Q3UMQ8 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Naf1Q3UMQ8 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Naf1Q3UMQ8 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Naf1Q3UMQ8 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.19■□□□□ 0.34
Naf1Q3UMQ8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Naf1Q3UMQ8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Naf1Q3UMQ8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Naf1Q3UMQ8 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Naf1Q3UMQ8 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Naf1Q3UMQ8 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Naf1Q3UMQ8 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Naf1Q3UMQ8 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Naf1Q3UMQ8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Naf1Q3UMQ8 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Naf1Q3UMQ8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Naf1Q3UMQ8 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.18■□□□□ 0.34
Naf1Q3UMQ8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
Naf1Q3UMQ8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Naf1Q3UMQ8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Naf1Q3UMQ8 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Naf1Q3UMQ8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Naf1Q3UMQ8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Naf1Q3UMQ8 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.17■□□□□ 0.34
Naf1Q3UMQ8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Naf1Q3UMQ8 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Naf1Q3UMQ8 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Naf1Q3UMQ8 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Naf1Q3UMQ8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Naf1Q3UMQ8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Naf1Q3UMQ8 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Naf1Q3UMQ8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Naf1Q3UMQ8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.17■□□□□ 0.34
Naf1Q3UMQ8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Naf1Q3UMQ8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Naf1Q3UMQ8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
Naf1Q3UMQ8 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.17■□□□□ 0.34
Naf1Q3UMQ8 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Gm14859-201ENSMUST00000117752 357 ntBASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Gm27704-201ENSMUST00000185094 107 ntBASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Naf1Q3UMQ8 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Naf1Q3UMQ8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Naf1Q3UMQ8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Naf1Q3UMQ8 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Naf1Q3UMQ8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Naf1Q3UMQ8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Naf1Q3UMQ8 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Naf1Q3UMQ8 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Naf1Q3UMQ8 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
Naf1Q3UMQ8 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Naf1Q3UMQ8 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Naf1Q3UMQ8 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Naf1Q3UMQ8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Naf1Q3UMQ8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Naf1Q3UMQ8 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Naf1Q3UMQ8 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.14■□□□□ 0.34
Naf1Q3UMQ8 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Naf1Q3UMQ8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Naf1Q3UMQ8 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Naf1Q3UMQ8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Naf1Q3UMQ8 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Naf1Q3UMQ8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Naf1Q3UMQ8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Naf1Q3UMQ8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Naf1Q3UMQ8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms