Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Spg11Q3UHA3 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Spg11Q3UHA3 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Spg11Q3UHA3 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Spg11Q3UHA3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
Spg11Q3UHA3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 Gm7222-201ENSMUST00000117512 906 ntBASIC15.58■□□□□ 0.08
Spg11Q3UHA3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.58■□□□□ 0.08
Spg11Q3UHA3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Spg11Q3UHA3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Gm25745-201ENSMUST00000174945 133 ntBASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Gm12497-201ENSMUST00000138778 237 ntBASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Gm5866-201ENSMUST00000177881 973 ntBASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Spg11Q3UHA3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Spg11Q3UHA3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Spg11Q3UHA3 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Spg11Q3UHA3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC15.55■□□□□ 0.08
Spg11Q3UHA3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Spg11Q3UHA3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Spg11Q3UHA3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Spg11Q3UHA3 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.55■□□□□ 0.08
Spg11Q3UHA3 Gm2423-201ENSMUST00000074863 733 ntBASIC15.55■□□□□ 0.08
Spg11Q3UHA3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.55■□□□□ 0.08
Spg11Q3UHA3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Spg11Q3UHA3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Spg11Q3UHA3 Gm42922-201ENSMUST00000195887 2078 ntBASIC15.55■□□□□ 0.08
Spg11Q3UHA3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC15.55■□□□□ 0.08
Spg11Q3UHA3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Spg11Q3UHA3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Spg11Q3UHA3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Spg11Q3UHA3 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.55■□□□□ 0.08
Spg11Q3UHA3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.55■□□□□ 0.08
Spg11Q3UHA3 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Spg11Q3UHA3 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 191.1 ms