Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Col5a2Q3U962 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col5a2Q3U962 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col5a2Q3U962 Gm9727-201ENSMUST00000161387 555 ntBASIC20.06■□□□□ 0.8
Col5a2Q3U962 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.06■□□□□ 0.8
Col5a2Q3U962 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col5a2Q3U962 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col5a2Q3U962 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col5a2Q3U962 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col5a2Q3U962 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col5a2Q3U962 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col5a2Q3U962 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col5a2Q3U962 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col5a2Q3U962 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col5a2Q3U962 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col5a2Q3U962 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col5a2Q3U962 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col5a2Q3U962 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Col5a2Q3U962 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Col5a2Q3U962 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC20.06■□□□□ 0.8
Col5a2Q3U962 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col5a2Q3U962 Gm13418-201ENSMUST00000119097 944 ntBASIC20.05■□□□□ 0.8
Col5a2Q3U962 Gm43935-201ENSMUST00000203569 1050 ntBASIC20.05■□□□□ 0.8
Col5a2Q3U962 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.05■□□□□ 0.8
Col5a2Q3U962 AC154222.1-201ENSMUST00000223882 475 ntBASIC20.05■□□□□ 0.8
Col5a2Q3U962 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Col5a2Q3U962 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.05■□□□□ 0.8
Col5a2Q3U962 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col5a2Q3U962 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col5a2Q3U962 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Col5a2Q3U962 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Col5a2Q3U962 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.05■□□□□ 0.8
Col5a2Q3U962 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC20.05■□□□□ 0.8
Col5a2Q3U962 Gm24513-201ENSMUST00000174964 138 ntBASIC20.05■□□□□ 0.8
Col5a2Q3U962 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC20.05■□□□□ 0.8
Col5a2Q3U962 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.05■□□□□ 0.8
Col5a2Q3U962 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC20.05■□□□□ 0.8
Col5a2Q3U962 AC084391.1-201ENSMUST00000200651 141 ntBASIC20.05■□□□□ 0.8
Col5a2Q3U962 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.05■□□□□ 0.8
Col5a2Q3U962 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC20.05■□□□□ 0.8
Col5a2Q3U962 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.05■□□□□ 0.8
Col5a2Q3U962 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC20.05■□□□□ 0.8
Col5a2Q3U962 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Col5a2Q3U962 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col5a2Q3U962 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Col5a2Q3U962 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
Col5a2Q3U962 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.04■□□□□ 0.8
Col5a2Q3U962 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.04■□□□□ 0.8
Col5a2Q3U962 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col5a2Q3U962 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col5a2Q3U962 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC20.04■□□□□ 0.8
Col5a2Q3U962 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col5a2Q3U962 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col5a2Q3U962 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col5a2Q3U962 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Col5a2Q3U962 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC20.04■□□□□ 0.8
Col5a2Q3U962 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Col5a2Q3U962 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Col5a2Q3U962 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col5a2Q3U962 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC20.03■□□□□ 0.8
Col5a2Q3U962 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.03■□□□□ 0.8
Col5a2Q3U962 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Col5a2Q3U962 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col5a2Q3U962 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Col5a2Q3U962 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col5a2Q3U962 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC20.02■□□□□ 0.8
Col5a2Q3U962 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col5a2Q3U962 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.02■□□□□ 0.8
Col5a2Q3U962 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col5a2Q3U962 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col5a2Q3U962 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC20.02■□□□□ 0.8
Col5a2Q3U962 AV026068-213ENSMUST00000223675 1171 ntBASIC20.02■□□□□ 0.8
Col5a2Q3U962 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col5a2Q3U962 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col5a2Q3U962 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col5a2Q3U962 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Col5a2Q3U962 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC20.02■□□□□ 0.8
Col5a2Q3U962 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Col5a2Q3U962 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col5a2Q3U962 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Col5a2Q3U962 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.01■□□□□ 0.79
Col5a2Q3U962 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.01■□□□□ 0.79
Col5a2Q3U962 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms