Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Gm7791-201ENSMUST00000219066 539 ntBASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.09■□□□□ 0.17
Khdc4Q3TCX3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Khdc4Q3TCX3 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Khdc4Q3TCX3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Khdc4Q3TCX3 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Khdc4Q3TCX3 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Khdc4Q3TCX3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Khdc4Q3TCX3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 Gm16061-201ENSMUST00000122167 857 ntBASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Khdc4Q3TCX3 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Gm14859-201ENSMUST00000117752 357 ntBASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Khdc4Q3TCX3 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Khdc4Q3TCX3 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 69.5 ms