Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cul4aQ3TCH7 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Cul4aQ3TCH7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cul4aQ3TCH7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cul4aQ3TCH7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.77■□□□□ 0.44
Cul4aQ3TCH7 Gm27000-201ENSMUST00000182943 842 ntBASIC17.77■□□□□ 0.44
Cul4aQ3TCH7 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.77■□□□□ 0.44
Cul4aQ3TCH7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cul4aQ3TCH7 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
Cul4aQ3TCH7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cul4aQ3TCH7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Cul4aQ3TCH7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cul4aQ3TCH7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cul4aQ3TCH7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cul4aQ3TCH7 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cul4aQ3TCH7 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Cul4aQ3TCH7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cul4aQ3TCH7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Cul4aQ3TCH7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cul4aQ3TCH7 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cul4aQ3TCH7 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Cul4aQ3TCH7 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Cul4aQ3TCH7 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.75■□□□□ 0.43
Cul4aQ3TCH7 Gm10698-201ENSMUST00000182663 604 ntBASIC17.75■□□□□ 0.43
Cul4aQ3TCH7 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cul4aQ3TCH7 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cul4aQ3TCH7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cul4aQ3TCH7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cul4aQ3TCH7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cul4aQ3TCH7 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cul4aQ3TCH7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cul4aQ3TCH7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cul4aQ3TCH7 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cul4aQ3TCH7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cul4aQ3TCH7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.73■□□□□ 0.43
Cul4aQ3TCH7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cul4aQ3TCH7 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cul4aQ3TCH7 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cul4aQ3TCH7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Cul4aQ3TCH7 Dancr-204ENSMUST00000132389 2347 ntBASIC17.73■□□□□ 0.43
Cul4aQ3TCH7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cul4aQ3TCH7 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cul4aQ3TCH7 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cul4aQ3TCH7 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 Gm15378-201ENSMUST00000121894 207 ntBASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 Gm9731-201ENSMUST00000209480 747 ntBASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cul4aQ3TCH7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms