Protein–RNA interactions for Protein: Q3KNJ2

Nhej1, Non-homologous end-joining factor 1, mousemouse

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhej1Q3KNJ2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Gm27275-201ENSMUST00000184318 272 ntBASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Nhej1Q3KNJ2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Nhej1Q3KNJ2 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.03■□□□□ 0.48
Nhej1Q3KNJ2 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nhej1Q3KNJ2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nhej1Q3KNJ2 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Nhej1Q3KNJ2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Nhej1Q3KNJ2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Nhej1Q3KNJ2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nhej1Q3KNJ2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nhej1Q3KNJ2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.03■□□□□ 0.48
Nhej1Q3KNJ2 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nhej1Q3KNJ2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nhej1Q3KNJ2 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nhej1Q3KNJ2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.03■□□□□ 0.48
Nhej1Q3KNJ2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Nhej1Q3KNJ2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Nhej1Q3KNJ2 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nhej1Q3KNJ2 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.02■□□□□ 0.47
Nhej1Q3KNJ2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nhej1Q3KNJ2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
Nhej1Q3KNJ2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nhej1Q3KNJ2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nhej1Q3KNJ2 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nhej1Q3KNJ2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Nhej1Q3KNJ2 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Nhej1Q3KNJ2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Nhej1Q3KNJ2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Nhej1Q3KNJ2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nhej1Q3KNJ2 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.01■□□□□ 0.47
Nhej1Q3KNJ2 Gm18666-201ENSMUST00000190039 958 ntBASIC18.01■□□□□ 0.47
Nhej1Q3KNJ2 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.01■□□□□ 0.47
Nhej1Q3KNJ2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.01■□□□□ 0.47
Nhej1Q3KNJ2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Nhej1Q3KNJ2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Nhej1Q3KNJ2 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nhej1Q3KNJ2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Nhej1Q3KNJ2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.01■□□□□ 0.47
Nhej1Q3KNJ2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nhej1Q3KNJ2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Nhej1Q3KNJ2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nhej1Q3KNJ2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nhej1Q3KNJ2 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nhej1Q3KNJ2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18■□□□□ 0.47
Nhej1Q3KNJ2 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nhej1Q3KNJ2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nhej1Q3KNJ2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Nhej1Q3KNJ2 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18■□□□□ 0.47
Nhej1Q3KNJ2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Nhej1Q3KNJ2 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Nhej1Q3KNJ2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18■□□□□ 0.47
Nhej1Q3KNJ2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18■□□□□ 0.47
Nhej1Q3KNJ2 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Nhej1Q3KNJ2 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nhej1Q3KNJ2 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms