Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Mtag2-201ENSMUST00000058665 714 ntBASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptchd3Q0EEE2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptchd3Q0EEE2 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptchd3Q0EEE2 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ptchd3Q0EEE2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ptchd3Q0EEE2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptchd3Q0EEE2 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptchd3Q0EEE2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ptchd3Q0EEE2 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptchd3Q0EEE2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptchd3Q0EEE2 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ptchd3Q0EEE2 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptchd3Q0EEE2 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptchd3Q0EEE2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptchd3Q0EEE2 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ptchd3Q0EEE2 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptchd3Q0EEE2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptchd3Q0EEE2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptchd3Q0EEE2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ptchd3Q0EEE2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Gm36858-201ENSMUST00000194501 2391 ntBASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Dio3-201ENSMUST00000097228 1449 ntBASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Ptchd3Q0EEE2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Ptchd3Q0EEE2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ptchd3Q0EEE2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ptchd3Q0EEE2 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.33■□□□□ 0.21
Ptchd3Q0EEE2 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ptchd3Q0EEE2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Ptchd3Q0EEE2 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ptchd3Q0EEE2 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ptchd3Q0EEE2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ptchd3Q0EEE2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC16.33■□□□□ 0.2
Ptchd3Q0EEE2 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.33■□□□□ 0.2
Ptchd3Q0EEE2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ptchd3Q0EEE2 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ptchd3Q0EEE2 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.33■□□□□ 0.2
Ptchd3Q0EEE2 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.33■□□□□ 0.2
Ptchd3Q0EEE2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ptchd3Q0EEE2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ptchd3Q0EEE2 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ptchd3Q0EEE2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ptchd3Q0EEE2 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms