Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hspg2Q05793 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hspg2Q05793 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hspg2Q05793 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.46□□□□□ -0.41
Hspg2Q05793 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC12.46□□□□□ -0.41
Hspg2Q05793 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.46□□□□□ -0.41
Hspg2Q05793 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hspg2Q05793 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC12.46□□□□□ -0.41
Hspg2Q05793 Gm44450-201ENSMUST00000199528 114 ntBASIC12.46□□□□□ -0.41
Hspg2Q05793 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Hspg2Q05793 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Hspg2Q05793 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Hspg2Q05793 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.46□□□□□ -0.42
Hspg2Q05793 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Hspg2Q05793 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hspg2Q05793 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hspg2Q05793 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.46□□□□□ -0.42
Hspg2Q05793 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.46□□□□□ -0.42
Hspg2Q05793 Chchd1-203ENSMUST00000224633 557 ntBASIC12.46□□□□□ -0.42
Hspg2Q05793 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Hspg2Q05793 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hspg2Q05793 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hspg2Q05793 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hspg2Q05793 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hspg2Q05793 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Hspg2Q05793 Gm7230-201ENSMUST00000173026 815 ntBASIC12.45□□□□□ -0.42
Hspg2Q05793 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.45□□□□□ -0.42
Hspg2Q05793 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.45□□□□□ -0.42
Hspg2Q05793 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
Hspg2Q05793 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hspg2Q05793 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hspg2Q05793 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hspg2Q05793 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC12.45□□□□□ -0.42
Hspg2Q05793 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hspg2Q05793 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hspg2Q05793 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.45□□□□□ -0.42
Hspg2Q05793 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hspg2Q05793 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.45□□□□□ -0.42
Hspg2Q05793 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hspg2Q05793 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC12.45□□□□□ -0.42
Hspg2Q05793 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hspg2Q05793 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC12.45□□□□□ -0.42
Hspg2Q05793 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Hspg2Q05793 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Hspg2Q05793 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC12.45□□□□□ -0.42
Hspg2Q05793 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC12.45□□□□□ -0.42
Hspg2Q05793 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Hspg2Q05793 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Hspg2Q05793 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.44□□□□□ -0.42
Hspg2Q05793 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Hspg2Q05793 Gm15165-201ENSMUST00000118140 502 ntBASIC12.44□□□□□ -0.42
Hspg2Q05793 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
Hspg2Q05793 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC12.44□□□□□ -0.42
Hspg2Q05793 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.44□□□□□ -0.42
Hspg2Q05793 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Hspg2Q05793 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.44□□□□□ -0.42
Hspg2Q05793 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 Gm6376-201ENSMUST00000209407 580 ntBASIC12.44□□□□□ -0.42
Hspg2Q05793 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.44□□□□□ -0.42
Hspg2Q05793 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Hspg2Q05793 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Hspg2Q05793 Rprl3-201ENSMUST00000157400 290 ntBASIC12.43□□□□□ -0.42
Hspg2Q05793 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Hspg2Q05793 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Hspg2Q05793 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Hspg2Q05793 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms