Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
Nkx3-2P97503 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx3-2P97503 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Nkx3-2P97503 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Nkx3-2P97503 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Nkx3-2P97503 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Nkx3-2P97503 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Nkx3-2P97503 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.95■□□□□ 0.14
Nkx3-2P97503 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Nkx3-2P97503 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.94■□□□□ 0.14
Nkx3-2P97503 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Gm25016-201ENSMUST00000158399 131 ntBASIC15.94■□□□□ 0.14
Nkx3-2P97503 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Nkx3-2P97503 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx3-2P97503 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx3-2P97503 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx3-2P97503 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx3-2P97503 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx3-2P97503 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx3-2P97503 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx3-2P97503 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx3-2P97503 Gm6345-202ENSMUST00000180900 204 ntBASIC15.93■□□□□ 0.14
Nkx3-2P97503 Gm27389-201ENSMUST00000183622 195 ntBASIC15.93■□□□□ 0.14
Nkx3-2P97503 Gm21559-201ENSMUST00000220638 855 ntBASIC15.93■□□□□ 0.14
Nkx3-2P97503 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx3-2P97503 Gm8587-201ENSMUST00000076538 843 ntBASIC15.93■□□□□ 0.14
Nkx3-2P97503 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Nkx3-2P97503 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nkx3-2P97503 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms