Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Npas1P97459 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npas1P97459 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.22□□□□□ -0.13
Npas1P97459 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Npas1P97459 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
Npas1P97459 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npas1P97459 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npas1P97459 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npas1P97459 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npas1P97459 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Npas1P97459 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npas1P97459 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Npas1P97459 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npas1P97459 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Npas1P97459 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Npas1P97459 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Npas1P97459 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.21□□□□□ -0.13
Npas1P97459 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Npas1P97459 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Npas1P97459 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Npas1P97459 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Npas1P97459 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Npas1P97459 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Npas1P97459 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Npas1P97459 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Npas1P97459 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.2□□□□□ -0.14
Npas1P97459 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.2□□□□□ -0.14
Npas1P97459 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Npas1P97459 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Npas1P97459 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Npas1P97459 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Npas1P97459 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Npas1P97459 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Npas1P97459 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Npas1P97459 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.19□□□□□ -0.14
Npas1P97459 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC14.19□□□□□ -0.14
Npas1P97459 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.19□□□□□ -0.14
Npas1P97459 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Npas1P97459 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Npas1P97459 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Npas1P97459 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Npas1P97459 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.18□□□□□ -0.14
Npas1P97459 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Npas1P97459 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Npas1P97459 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Npas1P97459 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Npas1P97459 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms