Protein–RNA interactions for Protein: P97326

Cdh6, Cadherin-6, mousemouse

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh6P97326 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.13■□□□□ 0.33
Cdh6P97326 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Cdh6P97326 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh6P97326 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh6P97326 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cdh6P97326 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cdh6P97326 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.13■□□□□ 0.33
Cdh6P97326 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh6P97326 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.13■□□□□ 0.33
Cdh6P97326 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh6P97326 Gm18959-201ENSMUST00000208954 655 ntBASIC17.13■□□□□ 0.33
Cdh6P97326 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.13■□□□□ 0.33
Cdh6P97326 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.13■□□□□ 0.33
Cdh6P97326 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cdh6P97326 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh6P97326 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh6P97326 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh6P97326 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh6P97326 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh6P97326 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cdh6P97326 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Cdh6P97326 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh6P97326 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh6P97326 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cdh6P97326 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh6P97326 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh6P97326 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh6P97326 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh6P97326 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh6P97326 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh6P97326 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh6P97326 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.12■□□□□ 0.33
Cdh6P97326 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh6P97326 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh6P97326 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh6P97326 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh6P97326 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh6P97326 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh6P97326 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh6P97326 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh6P97326 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh6P97326 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh6P97326 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cdh6P97326 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh6P97326 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh6P97326 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh6P97326 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh6P97326 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh6P97326 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cdh6P97326 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh6P97326 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh6P97326 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh6P97326 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh6P97326 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdh6P97326 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh6P97326 Mir5130-201ENSMUST00000175160 84 ntBASIC17.11■□□□□ 0.33
Cdh6P97326 Gm45058-201ENSMUST00000205810 766 ntBASIC17.11■□□□□ 0.33
Cdh6P97326 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Cdh6P97326 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh6P97326 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh6P97326 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.11■□□□□ 0.33
Cdh6P97326 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.11■□□□□ 0.33
Cdh6P97326 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cdh6P97326 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh6P97326 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh6P97326 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Cdh6P97326 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh6P97326 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh6P97326 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cdh6P97326 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh6P97326 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cdh6P97326 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh6P97326 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cdh6P97326 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh6P97326 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh6P97326 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cdh6P97326 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh6P97326 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh6P97326 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdh6P97326 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.1■□□□□ 0.33
Cdh6P97326 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh6P97326 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh6P97326 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.1■□□□□ 0.33
Cdh6P97326 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cdh6P97326 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh6P97326 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh6P97326 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh6P97326 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh6P97326 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdh6P97326 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh6P97326 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.09■□□□□ 0.33
Cdh6P97326 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Cdh6P97326 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh6P97326 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh6P97326 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh6P97326 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh6P97326 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cdh6P97326 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh6P97326 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cdh6P97326 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms