Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SgcaP82350 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.23□□□□□ -0.13
SgcaP82350 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.22□□□□□ -0.13
SgcaP82350 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.22□□□□□ -0.13
SgcaP82350 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC14.22□□□□□ -0.13
SgcaP82350 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SgcaP82350 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.22□□□□□ -0.13
SgcaP82350 Nespas-201ENSMUST00000143738 1083 ntBASIC14.22□□□□□ -0.13
SgcaP82350 Mir8112-201ENSMUST00000184382 131 ntBASIC14.22□□□□□ -0.13
SgcaP82350 Gm6420-201ENSMUST00000193885 723 ntBASIC14.22□□□□□ -0.13
SgcaP82350 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SgcaP82350 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
SgcaP82350 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SgcaP82350 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SgcaP82350 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SgcaP82350 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SgcaP82350 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.21□□□□□ -0.13
SgcaP82350 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SgcaP82350 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SgcaP82350 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SgcaP82350 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SgcaP82350 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SgcaP82350 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SgcaP82350 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.21□□□□□ -0.13
SgcaP82350 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SgcaP82350 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SgcaP82350 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SgcaP82350 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SgcaP82350 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SgcaP82350 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SgcaP82350 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SgcaP82350 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SgcaP82350 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
SgcaP82350 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SgcaP82350 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SgcaP82350 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcaP82350 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcaP82350 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcaP82350 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SgcaP82350 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcaP82350 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.2□□□□□ -0.14
SgcaP82350 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SgcaP82350 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcaP82350 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SgcaP82350 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcaP82350 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
SgcaP82350 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcaP82350 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SgcaP82350 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcaP82350 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.2□□□□□ -0.14
SgcaP82350 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcaP82350 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcaP82350 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcaP82350 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SgcaP82350 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SgcaP82350 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcaP82350 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcaP82350 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcaP82350 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcaP82350 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcaP82350 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.19□□□□□ -0.14
SgcaP82350 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.19□□□□□ -0.14
SgcaP82350 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.19□□□□□ -0.14
SgcaP82350 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcaP82350 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SgcaP82350 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.19□□□□□ -0.14
SgcaP82350 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcaP82350 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcaP82350 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SgcaP82350 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcaP82350 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
SgcaP82350 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcaP82350 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcaP82350 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcaP82350 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
SgcaP82350 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcaP82350 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SgcaP82350 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SgcaP82350 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcaP82350 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SgcaP82350 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
SgcaP82350 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms