Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcdP82347 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcdP82347 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcdP82347 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SgcdP82347 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.71■□□□□ 0.11
SgcdP82347 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.71■□□□□ 0.11
SgcdP82347 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.71■□□□□ 0.11
SgcdP82347 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.71■□□□□ 0.11
SgcdP82347 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcdP82347 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.71■□□□□ 0.11
SgcdP82347 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SgcdP82347 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcdP82347 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SgcdP82347 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC15.71■□□□□ 0.11
SgcdP82347 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcdP82347 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SgcdP82347 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SgcdP82347 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
SgcdP82347 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.71■□□□□ 0.1
SgcdP82347 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SgcdP82347 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SgcdP82347 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SgcdP82347 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcdP82347 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcdP82347 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcdP82347 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcdP82347 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcdP82347 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SgcdP82347 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcdP82347 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcdP82347 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcdP82347 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SgcdP82347 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.7■□□□□ 0.1
SgcdP82347 Gm13216-201ENSMUST00000117145 591 ntBASIC15.7■□□□□ 0.1
SgcdP82347 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcdP82347 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.7■□□□□ 0.1
SgcdP82347 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcdP82347 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcdP82347 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SgcdP82347 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.7■□□□□ 0.1
SgcdP82347 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcdP82347 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SgcdP82347 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SgcdP82347 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SgcdP82347 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC15.69■□□□□ 0.1
SgcdP82347 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcdP82347 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcdP82347 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcdP82347 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcdP82347 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcdP82347 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcdP82347 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcdP82347 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcdP82347 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SgcdP82347 Gm13534-201ENSMUST00000121169 513 ntBASIC15.69■□□□□ 0.1
SgcdP82347 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.69■□□□□ 0.1
SgcdP82347 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SgcdP82347 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcdP82347 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcdP82347 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SgcdP82347 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcdP82347 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SgcdP82347 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SgcdP82347 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcdP82347 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcdP82347 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SgcdP82347 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
SgcdP82347 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcdP82347 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SgcdP82347 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcdP82347 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcdP82347 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.68■□□□□ 0.1
SgcdP82347 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcdP82347 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcdP82347 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcdP82347 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.68■□□□□ 0.1
SgcdP82347 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcdP82347 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcdP82347 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SgcdP82347 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcdP82347 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SgcdP82347 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcdP82347 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcdP82347 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SgcdP82347 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SgcdP82347 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SgcdP82347 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcdP82347 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcdP82347 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SgcdP82347 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcdP82347 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcdP82347 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcdP82347 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcdP82347 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SgcdP82347 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SgcdP82347 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.67■□□□□ 0.1
SgcdP82347 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SgcdP82347 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.67■□□□□ 0.1
SgcdP82347 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC15.67■□□□□ 0.1
SgcdP82347 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms