Protein–RNA interactions for Protein: P70671

Irf3, Interferon regulatory factor 3, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf3P70671 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf3P70671 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Irf3P70671 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.35■□□□□ 0.53
Irf3P70671 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Irf3P70671 Gm11620-201ENSMUST00000118770 1845 ntBASIC18.35■□□□□ 0.53
Irf3P70671 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC18.34■□□□□ 0.53
Irf3P70671 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf3P70671 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Irf3P70671 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf3P70671 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Irf3P70671 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Irf3P70671 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC18.34■□□□□ 0.53
Irf3P70671 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.34■□□□□ 0.53
Irf3P70671 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf3P70671 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.34■□□□□ 0.53
Irf3P70671 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Irf3P70671 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Irf3P70671 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Irf3P70671 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Irf3P70671 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Irf3P70671 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Irf3P70671 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Irf3P70671 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Irf3P70671 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Irf3P70671 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Irf3P70671 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Irf3P70671 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Irf3P70671 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Irf3P70671 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Irf3P70671 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Irf3P70671 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Irf3P70671 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Irf3P70671 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.33■□□□□ 0.52
Irf3P70671 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Irf3P70671 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Irf3P70671 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Irf3P70671 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf3P70671 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf3P70671 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf3P70671 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf3P70671 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf3P70671 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Irf3P70671 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Irf3P70671 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Irf3P70671 Olfr129-201ENSMUST00000122318 993 ntBASIC18.32■□□□□ 0.52
Irf3P70671 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
Irf3P70671 Mir3081-201ENSMUST00000175305 84 ntBASIC18.32■□□□□ 0.52
Irf3P70671 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.32■□□□□ 0.52
Irf3P70671 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf3P70671 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.32■□□□□ 0.52
Irf3P70671 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf3P70671 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf3P70671 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf3P70671 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Irf3P70671 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf3P70671 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Irf3P70671 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Irf3P70671 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.32■□□□□ 0.52
Irf3P70671 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Irf3P70671 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.32■□□□□ 0.52
Irf3P70671 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Irf3P70671 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Irf3P70671 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Irf3P70671 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Irf3P70671 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Irf3P70671 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Irf3P70671 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Irf3P70671 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Irf3P70671 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Irf3P70671 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.31■□□□□ 0.52
Irf3P70671 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Irf3P70671 Gm28033-201ENSMUST00000184224 96 ntBASIC18.31■□□□□ 0.52
Irf3P70671 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Irf3P70671 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Irf3P70671 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Irf3P70671 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Irf3P70671 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Irf3P70671 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Irf3P70671 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
Irf3P70671 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Irf3P70671 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf3P70671 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Irf3P70671 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Irf3P70671 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Irf3P70671 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf3P70671 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf3P70671 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf3P70671 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf3P70671 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf3P70671 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.3■□□□□ 0.52
Irf3P70671 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf3P70671 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.3■□□□□ 0.52
Irf3P70671 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.3■□□□□ 0.52
Irf3P70671 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf3P70671 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf3P70671 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Irf3P70671 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Irf3P70671 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.29■□□□□ 0.52
Irf3P70671 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Irf3P70671 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms