Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim4P70271 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pdlim4P70271 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim4P70271 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Pdlim4P70271 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim4P70271 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pdlim4P70271 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.07□□□□□ -0.16
Pdlim4P70271 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.07□□□□□ -0.16
Pdlim4P70271 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim4P70271 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim4P70271 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim4P70271 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim4P70271 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Pdlim4P70271 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim4P70271 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Pdlim4P70271 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim4P70271 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim4P70271 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim4P70271 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim4P70271 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Pdlim4P70271 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim4P70271 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim4P70271 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.07□□□□□ -0.16
Pdlim4P70271 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Pdlim4P70271 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Pdlim4P70271 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.06□□□□□ -0.16
Pdlim4P70271 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Pdlim4P70271 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Pdlim4P70271 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.06□□□□□ -0.16
Pdlim4P70271 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Pdlim4P70271 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC14.06□□□□□ -0.16
Pdlim4P70271 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.06□□□□□ -0.16
Pdlim4P70271 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pdlim4P70271 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC14.06□□□□□ -0.16
Pdlim4P70271 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pdlim4P70271 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.05□□□□□ -0.16
Pdlim4P70271 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim4P70271 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC14.05□□□□□ -0.16
Pdlim4P70271 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pdlim4P70271 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim4P70271 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Pdlim4P70271 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Pdlim4P70271 Gm9731-201ENSMUST00000209480 747 ntBASIC14.05□□□□□ -0.16
Pdlim4P70271 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim4P70271 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim4P70271 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim4P70271 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim4P70271 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.05□□□□□ -0.16
Pdlim4P70271 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Pdlim4P70271 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim4P70271 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim4P70271 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim4P70271 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim4P70271 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pdlim4P70271 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pdlim4P70271 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.04□□□□□ -0.16
Pdlim4P70271 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pdlim4P70271 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Pdlim4P70271 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.04□□□□□ -0.16
Pdlim4P70271 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pdlim4P70271 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms