Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Crnkl1P63154 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Crnkl1P63154 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Crnkl1P63154 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.77■□□□□ 0.28
Crnkl1P63154 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Crnkl1P63154 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Crnkl1P63154 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Crnkl1P63154 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.77■□□□□ 0.28
Crnkl1P63154 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.77■□□□□ 0.28
Crnkl1P63154 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Crnkl1P63154 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Crnkl1P63154 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Crnkl1P63154 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Crnkl1P63154 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Crnkl1P63154 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Crnkl1P63154 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Crnkl1P63154 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Crnkl1P63154 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Crnkl1P63154 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Crnkl1P63154 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Crnkl1P63154 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Crnkl1P63154 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Crnkl1P63154 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Crnkl1P63154 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Crnkl1P63154 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Crnkl1P63154 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Crnkl1P63154 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Crnkl1P63154 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.76■□□□□ 0.27
Crnkl1P63154 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Crnkl1P63154 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Crnkl1P63154 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Crnkl1P63154 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Crnkl1P63154 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.76■□□□□ 0.27
Crnkl1P63154 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Crnkl1P63154 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Crnkl1P63154 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Crnkl1P63154 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Crnkl1P63154 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Crnkl1P63154 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.76■□□□□ 0.27
Crnkl1P63154 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Crnkl1P63154 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.75■□□□□ 0.27
Crnkl1P63154 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.75■□□□□ 0.27
Crnkl1P63154 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Crnkl1P63154 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Crnkl1P63154 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Crnkl1P63154 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.75■□□□□ 0.27
Crnkl1P63154 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Crnkl1P63154 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Crnkl1P63154 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Crnkl1P63154 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.74■□□□□ 0.27
Crnkl1P63154 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Crnkl1P63154 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Crnkl1P63154 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Crnkl1P63154 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Crnkl1P63154 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Crnkl1P63154 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Crnkl1P63154 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Crnkl1P63154 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Crnkl1P63154 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.73■□□□□ 0.27
Crnkl1P63154 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.73■□□□□ 0.27
Crnkl1P63154 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.73■□□□□ 0.27
Crnkl1P63154 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms