Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx1P63006 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx1P63006 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx1P63006 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Lhx1P63006 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx1P63006 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx1P63006 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Lhx1P63006 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC16.62■□□□□ 0.25
Lhx1P63006 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.62■□□□□ 0.25
Lhx1P63006 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Lhx1P63006 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Lhx1P63006 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.62■□□□□ 0.25
Lhx1P63006 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Lhx1P63006 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Lhx1P63006 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lhx1P63006 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lhx1P63006 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.61■□□□□ 0.25
Lhx1P63006 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Lhx1P63006 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lhx1P63006 Gm44832-201ENSMUST00000208849 2303 ntBASIC16.61■□□□□ 0.25
Lhx1P63006 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lhx1P63006 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lhx1P63006 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lhx1P63006 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lhx1P63006 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Lhx1P63006 Gm37722-201ENSMUST00000193757 208 ntBASIC16.61■□□□□ 0.25
Lhx1P63006 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.61■□□□□ 0.25
Lhx1P63006 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lhx1P63006 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lhx1P63006 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lhx1P63006 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
Lhx1P63006 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Lhx1P63006 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lhx1P63006 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.61■□□□□ 0.25
Lhx1P63006 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.61■□□□□ 0.25
Lhx1P63006 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Lhx1P63006 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx1P63006 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx1P63006 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx1P63006 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx1P63006 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx1P63006 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx1P63006 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx1P63006 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx1P63006 Gm18115-201ENSMUST00000221209 621 ntBASIC16.6■□□□□ 0.25
Lhx1P63006 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Lhx1P63006 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx1P63006 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.6■□□□□ 0.25
Lhx1P63006 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Lhx1P63006 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx1P63006 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx1P63006 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Lhx1P63006 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Lhx1P63006 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx1P63006 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx1P63006 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx1P63006 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx1P63006 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Lhx1P63006 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Lhx1P63006 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC16.59■□□□□ 0.25
Lhx1P63006 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.59■□□□□ 0.25
Lhx1P63006 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx1P63006 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx1P63006 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx1P63006 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.59■□□□□ 0.25
Lhx1P63006 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx1P63006 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.59■□□□□ 0.25
Lhx1P63006 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx1P63006 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.59■□□□□ 0.25
Lhx1P63006 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.59■□□□□ 0.25
Lhx1P63006 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx1P63006 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx1P63006 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx1P63006 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx1P63006 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx1P63006 Cxcl14-202ENSMUST00000224801 1467 ntBASIC16.59■□□□□ 0.25
Lhx1P63006 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx1P63006 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx1P63006 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Lhx1P63006 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms