Protein–RNA interactions for Protein: P62962

Pfn1, Profilin-1, mousemouse

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfn1P62962 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pfn1P62962 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.17□□□□□ -0.3
Pfn1P62962 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Pfn1P62962 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pfn1P62962 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pfn1P62962 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pfn1P62962 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.17□□□□□ -0.3
Pfn1P62962 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.17□□□□□ -0.3
Pfn1P62962 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.17□□□□□ -0.3
Pfn1P62962 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pfn1P62962 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfn1P62962 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfn1P62962 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pfn1P62962 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfn1P62962 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfn1P62962 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfn1P62962 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfn1P62962 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Pfn1P62962 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfn1P62962 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.16□□□□□ -0.3
Pfn1P62962 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfn1P62962 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfn1P62962 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pfn1P62962 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pfn1P62962 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfn1P62962 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfn1P62962 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.16□□□□□ -0.3
Pfn1P62962 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfn1P62962 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfn1P62962 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.16□□□□□ -0.3
Pfn1P62962 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pfn1P62962 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pfn1P62962 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfn1P62962 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfn1P62962 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfn1P62962 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfn1P62962 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfn1P62962 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pfn1P62962 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfn1P62962 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.15□□□□□ -0.3
Pfn1P62962 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pfn1P62962 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfn1P62962 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfn1P62962 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC13.15□□□□□ -0.3
Pfn1P62962 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Pfn1P62962 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Pfn1P62962 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC13.15□□□□□ -0.3
Pfn1P62962 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Pfn1P62962 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.15□□□□□ -0.3
Pfn1P62962 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pfn1P62962 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfn1P62962 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfn1P62962 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfn1P62962 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Pfn1P62962 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pfn1P62962 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Pfn1P62962 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Pfn1P62962 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Pfn1P62962 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Pfn1P62962 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfn1P62962 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.14□□□□□ -0.31
Pfn1P62962 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.14□□□□□ -0.31
Pfn1P62962 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pfn1P62962 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pfn1P62962 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfn1P62962 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfn1P62962 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfn1P62962 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pfn1P62962 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms