Protein–RNA interactions for Protein: P62322

Lsm5, U6 snRNA-associated Sm-like protein LSm5, mousemouse

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm5P62322 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm5P62322 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm5P62322 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm5P62322 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm5P62322 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm5P62322 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm5P62322 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm5P62322 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.18□□□□□ -0.14
Lsm5P62322 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm5P62322 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm5P62322 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.18□□□□□ -0.14
Lsm5P62322 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lsm5P62322 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Lsm5P62322 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.17□□□□□ -0.14
Lsm5P62322 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.17□□□□□ -0.14
Lsm5P62322 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Lsm5P62322 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.17□□□□□ -0.14
Lsm5P62322 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.17□□□□□ -0.14
Lsm5P62322 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Lsm5P62322 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Lsm5P62322 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.17□□□□□ -0.14
Lsm5P62322 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lsm5P62322 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.16□□□□□ -0.14
Lsm5P62322 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm5P62322 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm5P62322 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm5P62322 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm5P62322 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm5P62322 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm5P62322 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm5P62322 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm5P62322 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.16□□□□□ -0.14
Lsm5P62322 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.16□□□□□ -0.14
Lsm5P62322 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Lsm5P62322 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm5P62322 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm5P62322 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm5P62322 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Lsm5P62322 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Lsm5P62322 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm5P62322 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm5P62322 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm5P62322 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm5P62322 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm5P62322 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm5P62322 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm5P62322 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm5P62322 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Lsm5P62322 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm5P62322 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.15□□□□□ -0.14
Lsm5P62322 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm5P62322 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC14.15□□□□□ -0.14
Lsm5P62322 Gm21956-201ENSMUST00000179946 522 ntBASIC14.15□□□□□ -0.14
Lsm5P62322 Gm43017-201ENSMUST00000198296 752 ntBASIC14.15□□□□□ -0.14
Lsm5P62322 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm5P62322 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Lsm5P62322 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Lsm5P62322 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Lsm5P62322 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm5P62322 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm5P62322 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm5P62322 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.15□□□□□ -0.14
Lsm5P62322 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm5P62322 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Lsm5P62322 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Lsm5P62322 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Lsm5P62322 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm5P62322 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm5P62322 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm5P62322 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm5P62322 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm5P62322 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm5P62322 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm5P62322 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm5P62322 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Lsm5P62322 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm5P62322 Gm6139-201ENSMUST00000079261 882 ntBASIC14.14□□□□□ -0.15
Lsm5P62322 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm5P62322 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm5P62322 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm5P62322 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm5P62322 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Lsm5P62322 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms