Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sec61a1P61620 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sec61a1P61620 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sec61a1P61620 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sec61a1P61620 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.9□□□□□ -0.02
Sec61a1P61620 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sec61a1P61620 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.9□□□□□ -0.02
Sec61a1P61620 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Sec61a1P61620 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC14.9□□□□□ -0.02
Sec61a1P61620 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.9□□□□□ -0.02
Sec61a1P61620 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sec61a1P61620 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sec61a1P61620 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sec61a1P61620 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.9□□□□□ -0.02
Sec61a1P61620 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sec61a1P61620 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.9□□□□□ -0.02
Sec61a1P61620 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sec61a1P61620 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Sec61a1P61620 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sec61a1P61620 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Sec61a1P61620 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sec61a1P61620 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Sec61a1P61620 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
Sec61a1P61620 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61a1P61620 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61a1P61620 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61a1P61620 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61a1P61620 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Sec61a1P61620 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61a1P61620 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61a1P61620 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61a1P61620 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Sec61a1P61620 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61a1P61620 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61a1P61620 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.89□□□□□ -0.03
Sec61a1P61620 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61a1P61620 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61a1P61620 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61a1P61620 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61a1P61620 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61a1P61620 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61a1P61620 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61a1P61620 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Sec61a1P61620 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Sec61a1P61620 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a1P61620 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sec61a1P61620 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.88□□□□□ -0.03
Sec61a1P61620 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a1P61620 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a1P61620 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a1P61620 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a1P61620 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a1P61620 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sec61a1P61620 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a1P61620 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a1P61620 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a1P61620 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Sec61a1P61620 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Sec61a1P61620 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.88□□□□□ -0.03
Sec61a1P61620 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.88□□□□□ -0.03
Sec61a1P61620 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a1P61620 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a1P61620 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.88□□□□□ -0.03
Sec61a1P61620 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a1P61620 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a1P61620 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Sec61a1P61620 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.88□□□□□ -0.03
Sec61a1P61620 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.88□□□□□ -0.03
Sec61a1P61620 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a1P61620 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Sec61a1P61620 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.87□□□□□ -0.03
Sec61a1P61620 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a1P61620 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a1P61620 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a1P61620 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a1P61620 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a1P61620 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a1P61620 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a1P61620 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a1P61620 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a1P61620 Gm13216-201ENSMUST00000117145 591 ntBASIC14.87□□□□□ -0.03
Sec61a1P61620 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.87□□□□□ -0.03
Sec61a1P61620 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.87□□□□□ -0.03
Sec61a1P61620 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a1P61620 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Sec61a1P61620 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Sec61a1P61620 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a1P61620 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a1P61620 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a1P61620 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a1P61620 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.87□□□□□ -0.03
Sec61a1P61620 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a1P61620 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.87□□□□□ -0.03
Sec61a1P61620 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.87□□□□□ -0.03
Sec61a1P61620 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a1P61620 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Sec61a1P61620 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Sec61a1P61620 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.86□□□□□ -0.03
Sec61a1P61620 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Sec61a1P61620 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms