Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3b6P59708 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sf3b6P59708 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.03■□□□□ -0
Sf3b6P59708 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Sf3b6P59708 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3b6P59708 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3b6P59708 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
Sf3b6P59708 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3b6P59708 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.02■□□□□ -0
Sf3b6P59708 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3b6P59708 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3b6P59708 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3b6P59708 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.02■□□□□ -0
Sf3b6P59708 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Sf3b6P59708 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sf3b6P59708 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.02■□□□□ -0
Sf3b6P59708 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sf3b6P59708 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.02□□□□□ -0.01
Sf3b6P59708 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Sf3b6P59708 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.02□□□□□ -0.01
Sf3b6P59708 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b6P59708 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b6P59708 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b6P59708 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b6P59708 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b6P59708 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b6P59708 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Sf3b6P59708 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b6P59708 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b6P59708 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Sf3b6P59708 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b6P59708 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b6P59708 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sf3b6P59708 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Sf3b6P59708 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b6P59708 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.01□□□□□ -0.01
Sf3b6P59708 Gm11927-201ENSMUST00000118472 759 ntBASIC15.01□□□□□ -0.01
Sf3b6P59708 Gm12441-201ENSMUST00000121806 588 ntBASIC15.01□□□□□ -0.01
Sf3b6P59708 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.01□□□□□ -0.01
Sf3b6P59708 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.01□□□□□ -0.01
Sf3b6P59708 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b6P59708 Mtag2-201ENSMUST00000058665 714 ntBASIC15.01□□□□□ -0.01
Sf3b6P59708 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b6P59708 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b6P59708 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b6P59708 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b6P59708 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b6P59708 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b6P59708 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.01□□□□□ -0.01
Sf3b6P59708 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.01□□□□□ -0.01
Sf3b6P59708 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b6P59708 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Sf3b6P59708 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15□□□□□ -0.01
Sf3b6P59708 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b6P59708 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b6P59708 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b6P59708 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sf3b6P59708 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15□□□□□ -0.01
Sf3b6P59708 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Sf3b6P59708 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15□□□□□ -0.01
Sf3b6P59708 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Sf3b6P59708 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15□□□□□ -0.01
Sf3b6P59708 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15□□□□□ -0.01
Sf3b6P59708 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b6P59708 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15□□□□□ -0.01
Sf3b6P59708 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b6P59708 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15□□□□□ -0.01
Sf3b6P59708 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15□□□□□ -0.01
Sf3b6P59708 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Sf3b6P59708 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b6P59708 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b6P59708 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b6P59708 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b6P59708 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b6P59708 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15□□□□□ -0.01
Sf3b6P59708 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15□□□□□ -0.01
Sf3b6P59708 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Sf3b6P59708 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Sf3b6P59708 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Sf3b6P59708 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Sf3b6P59708 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.99□□□□□ -0.01
Sf3b6P59708 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.99□□□□□ -0.01
Sf3b6P59708 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.99□□□□□ -0.01
Sf3b6P59708 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Sf3b6P59708 Gm4968-201ENSMUST00000071458 858 ntBASIC14.99□□□□□ -0.01
Sf3b6P59708 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Sf3b6P59708 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms