Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Tpm2P58774 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm2P58774 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm2P58774 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm2P58774 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm2P58774 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm2P58774 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm2P58774 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Tpm2P58774 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm2P58774 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm2P58774 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Tpm2P58774 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm2P58774 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm2P58774 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm2P58774 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm2P58774 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm2P58774 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm2P58774 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC19.44■□□□□ 0.7
Tpm2P58774 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm2P58774 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.44■□□□□ 0.7
Tpm2P58774 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm2P58774 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC19.44■□□□□ 0.7
Tpm2P58774 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.44■□□□□ 0.7
Tpm2P58774 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm2P58774 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm2P58774 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm2P58774 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Tpm2P58774 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm2P58774 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Tpm2P58774 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm2P58774 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm2P58774 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Tpm2P58774 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm2P58774 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC19.43■□□□□ 0.7
Tpm2P58774 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm2P58774 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.43■□□□□ 0.7
Tpm2P58774 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Tpm2P58774 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.43■□□□□ 0.7
Tpm2P58774 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm2P58774 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Tpm2P58774 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Tpm2P58774 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Tpm2P58774 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC19.43■□□□□ 0.7
Tpm2P58774 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm2P58774 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm2P58774 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Tpm2P58774 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC19.43■□□□□ 0.7
Tpm2P58774 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm2P58774 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Tpm2P58774 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm2P58774 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm2P58774 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm2P58774 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm2P58774 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
Tpm2P58774 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm2P58774 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Tpm2P58774 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm2P58774 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm2P58774 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Tpm2P58774 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm2P58774 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.42■□□□□ 0.7
Tpm2P58774 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm2P58774 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Tpm2P58774 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm2P58774 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
Tpm2P58774 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm2P58774 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Tpm2P58774 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm2P58774 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm2P58774 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Tpm2P58774 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm2P58774 Gm2399-201ENSMUST00000104944 225 ntBASIC19.41■□□□□ 0.7
Tpm2P58774 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Tpm2P58774 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Tpm2P58774 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm2P58774 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm2P58774 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm2P58774 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm2P58774 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm2P58774 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm2P58774 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Tpm2P58774 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm2P58774 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Tpm2P58774 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm2P58774 Gm16011-201ENSMUST00000121567 2662 ntBASIC19.4■□□□□ 0.7
Tpm2P58774 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm2P58774 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm2P58774 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm2P58774 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm2P58774 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm2P58774 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.4■□□□□ 0.7
Tpm2P58774 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.4■□□□□ 0.7
Tpm2P58774 AC133083.1-201ENSMUST00000221736 2209 ntBASIC19.4■□□□□ 0.7
Tpm2P58774 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm2P58774 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Tpm2P58774 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tpm2P58774 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Tpm2P58774 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Tpm2P58774 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.39■□□□□ 0.7
Tpm2P58774 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms