Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
SmoP56726 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
SmoP56726 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.02■□□□□ 0.31
SmoP56726 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SmoP56726 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
SmoP56726 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SmoP56726 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SmoP56726 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SmoP56726 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SmoP56726 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SmoP56726 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SmoP56726 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SmoP56726 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SmoP56726 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.01■□□□□ 0.31
SmoP56726 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SmoP56726 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SmoP56726 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SmoP56726 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SmoP56726 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SmoP56726 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SmoP56726 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SmoP56726 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SmoP56726 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SmoP56726 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17■□□□□ 0.31
SmoP56726 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SmoP56726 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17■□□□□ 0.31
SmoP56726 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17■□□□□ 0.31
SmoP56726 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17■□□□□ 0.31
SmoP56726 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17■□□□□ 0.31
SmoP56726 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SmoP56726 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17■□□□□ 0.31
SmoP56726 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17■□□□□ 0.31
SmoP56726 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SmoP56726 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SmoP56726 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SmoP56726 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SmoP56726 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SmoP56726 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.99■□□□□ 0.31
SmoP56726 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SmoP56726 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SmoP56726 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SmoP56726 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SmoP56726 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SmoP56726 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SmoP56726 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SmoP56726 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.99■□□□□ 0.31
SmoP56726 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.99■□□□□ 0.31
SmoP56726 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SmoP56726 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.99■□□□□ 0.31
SmoP56726 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SmoP56726 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SmoP56726 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
SmoP56726 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SmoP56726 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SmoP56726 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.99■□□□□ 0.31
SmoP56726 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SmoP56726 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SmoP56726 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
SmoP56726 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.99■□□□□ 0.31
SmoP56726 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SmoP56726 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SmoP56726 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SmoP56726 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SmoP56726 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SmoP56726 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SmoP56726 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SmoP56726 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SmoP56726 Gm11336-201ENSMUST00000118168 334 ntBASIC16.98■□□□□ 0.31
SmoP56726 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SmoP56726 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.98■□□□□ 0.31
SmoP56726 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SmoP56726 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.98■□□□□ 0.31
SmoP56726 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SmoP56726 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SmoP56726 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SmoP56726 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SmoP56726 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SmoP56726 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SmoP56726 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SmoP56726 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SmoP56726 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
SmoP56726 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.97■□□□□ 0.31
SmoP56726 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SmoP56726 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SmoP56726 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SmoP56726 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SmoP56726 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.97■□□□□ 0.31
SmoP56726 Gm29518-201ENSMUST00000190858 372 ntBASIC16.97■□□□□ 0.31
SmoP56726 Gm33142-201ENSMUST00000193913 867 ntBASIC16.97■□□□□ 0.31
SmoP56726 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.97■□□□□ 0.31
SmoP56726 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SmoP56726 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SmoP56726 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SmoP56726 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SmoP56726 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.97■□□□□ 0.31
SmoP56726 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SmoP56726 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SmoP56726 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SmoP56726 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SmoP56726 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms