Protein–RNA interactions for Protein: P54775

Psmc4, 26S proteasome regulatory subunit 6B, mousemouse

Predictions only

Length 418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc4P54775 Gm35558-201ENSMUST00000222675 2219 ntBASIC19.16■□□□□ 0.66
Psmc4P54775 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Psmc4P54775 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Psmc4P54775 Gm7935-201ENSMUST00000100555 1278 ntBASIC19.16■□□□□ 0.66
Psmc4P54775 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Psmc4P54775 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Psmc4P54775 Gm11336-201ENSMUST00000118168 334 ntBASIC19.16■□□□□ 0.66
Psmc4P54775 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Psmc4P54775 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC19.16■□□□□ 0.66
Psmc4P54775 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Psmc4P54775 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Psmc4P54775 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC19.16■□□□□ 0.66
Psmc4P54775 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Psmc4P54775 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.16■□□□□ 0.66
Psmc4P54775 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Psmc4P54775 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Psmc4P54775 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Psmc4P54775 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.15■□□□□ 0.66
Psmc4P54775 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Psmc4P54775 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Psmc4P54775 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Psmc4P54775 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.15■□□□□ 0.66
Psmc4P54775 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Psmc4P54775 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Psmc4P54775 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Psmc4P54775 Gm15372-201ENSMUST00000120729 834 ntBASIC19.15■□□□□ 0.66
Psmc4P54775 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Psmc4P54775 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC19.15■□□□□ 0.66
Psmc4P54775 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.15■□□□□ 0.66
Psmc4P54775 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Psmc4P54775 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Psmc4P54775 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Psmc4P54775 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Psmc4P54775 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Psmc4P54775 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Psmc4P54775 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Psmc4P54775 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Psmc4P54775 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Psmc4P54775 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Psmc4P54775 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmc4P54775 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.14■□□□□ 0.65
Psmc4P54775 Gm37374-201ENSMUST00000194954 1829 ntBASIC19.14■□□□□ 0.65
Psmc4P54775 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmc4P54775 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmc4P54775 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmc4P54775 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Psmc4P54775 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmc4P54775 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Psmc4P54775 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.14■□□□□ 0.65
Psmc4P54775 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmc4P54775 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmc4P54775 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmc4P54775 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmc4P54775 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmc4P54775 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmc4P54775 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmc4P54775 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Psmc4P54775 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Psmc4P54775 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Psmc4P54775 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Psmc4P54775 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Psmc4P54775 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Psmc4P54775 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Psmc4P54775 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.13■□□□□ 0.65
Psmc4P54775 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.13■□□□□ 0.65
Psmc4P54775 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.13■□□□□ 0.65
Psmc4P54775 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Psmc4P54775 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.13■□□□□ 0.65
Psmc4P54775 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Psmc4P54775 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC19.13■□□□□ 0.65
Psmc4P54775 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Psmc4P54775 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Psmc4P54775 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Psmc4P54775 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Psmc4P54775 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Psmc4P54775 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Psmc4P54775 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Psmc4P54775 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Psmc4P54775 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Psmc4P54775 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Psmc4P54775 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Psmc4P54775 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Psmc4P54775 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Psmc4P54775 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Psmc4P54775 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.12■□□□□ 0.65
Psmc4P54775 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Psmc4P54775 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Psmc4P54775 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.12■□□□□ 0.65
Psmc4P54775 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Psmc4P54775 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.12■□□□□ 0.65
Psmc4P54775 Rps4l-201ENSMUST00000071745 943 ntBASIC19.12■□□□□ 0.65
Psmc4P54775 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Psmc4P54775 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Psmc4P54775 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Psmc4P54775 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Psmc4P54775 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Psmc4P54775 Grk6-206ENSMUST00000224995 2971 ntBASIC19.11■□□□□ 0.65
Psmc4P54775 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Psmc4P54775 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Psmc4P54775 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms