Protein–RNA interactions for Protein: P51944

Ccnf, Cyclin-F, mousemouse

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnfP51944 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.12■□□□□ 0.17
CcnfP51944 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CcnfP51944 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
CcnfP51944 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CcnfP51944 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CcnfP51944 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CcnfP51944 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CcnfP51944 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CcnfP51944 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CcnfP51944 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
CcnfP51944 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.12■□□□□ 0.17
CcnfP51944 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CcnfP51944 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CcnfP51944 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CcnfP51944 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CcnfP51944 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CcnfP51944 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CcnfP51944 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CcnfP51944 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CcnfP51944 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.11■□□□□ 0.17
CcnfP51944 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CcnfP51944 Gm13148-201ENSMUST00000118892 745 ntBASIC16.11■□□□□ 0.17
CcnfP51944 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CcnfP51944 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.11■□□□□ 0.17
CcnfP51944 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.11■□□□□ 0.17
CcnfP51944 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CcnfP51944 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CcnfP51944 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.11■□□□□ 0.17
CcnfP51944 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CcnfP51944 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CcnfP51944 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CcnfP51944 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CcnfP51944 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CcnfP51944 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
CcnfP51944 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CcnfP51944 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.11■□□□□ 0.17
CcnfP51944 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CcnfP51944 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CcnfP51944 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CcnfP51944 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CcnfP51944 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CcnfP51944 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CcnfP51944 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CcnfP51944 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.1■□□□□ 0.17
CcnfP51944 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CcnfP51944 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CcnfP51944 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.1■□□□□ 0.17
CcnfP51944 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.1■□□□□ 0.17
CcnfP51944 Gm5408-201ENSMUST00000197998 747 ntBASIC16.1■□□□□ 0.17
CcnfP51944 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CcnfP51944 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CcnfP51944 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
CcnfP51944 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CcnfP51944 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CcnfP51944 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CcnfP51944 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CcnfP51944 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CcnfP51944 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CcnfP51944 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CcnfP51944 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CcnfP51944 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CcnfP51944 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CcnfP51944 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CcnfP51944 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CcnfP51944 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CcnfP51944 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CcnfP51944 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.09■□□□□ 0.17
CcnfP51944 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.09■□□□□ 0.17
CcnfP51944 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
CcnfP51944 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CcnfP51944 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.09■□□□□ 0.17
CcnfP51944 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CcnfP51944 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CcnfP51944 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CcnfP51944 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CcnfP51944 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CcnfP51944 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CcnfP51944 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CcnfP51944 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CcnfP51944 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CcnfP51944 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CcnfP51944 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms