Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.88■□□□□ 0.45
Shmt1P50431 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.88■□□□□ 0.45
Shmt1P50431 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Shmt1P50431 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Shmt1P50431 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shmt1P50431 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shmt1P50431 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shmt1P50431 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shmt1P50431 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shmt1P50431 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shmt1P50431 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.87■□□□□ 0.45
Shmt1P50431 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shmt1P50431 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC17.87■□□□□ 0.45
Shmt1P50431 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Shmt1P50431 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shmt1P50431 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shmt1P50431 Phf7-203ENSMUST00000226565 1971 ntBASIC17.87■□□□□ 0.45
Shmt1P50431 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Shmt1P50431 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Shmt1P50431 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shmt1P50431 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shmt1P50431 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Shmt1P50431 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Shmt1P50431 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Shmt1P50431 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Shmt1P50431 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Shmt1P50431 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Shmt1P50431 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.85■□□□□ 0.45
Shmt1P50431 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Shmt1P50431 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Shmt1P50431 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
Shmt1P50431 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
Shmt1P50431 Gm13186-201ENSMUST00000118031 316 ntBASIC17.85■□□□□ 0.45
Shmt1P50431 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Shmt1P50431 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Shmt1P50431 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Shmt1P50431 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC17.85■□□□□ 0.45
Shmt1P50431 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shmt1P50431 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shmt1P50431 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shmt1P50431 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shmt1P50431 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shmt1P50431 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shmt1P50431 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shmt1P50431 Gm8258-201ENSMUST00000055593 1449 ntBASIC17.85■□□□□ 0.45
Shmt1P50431 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shmt1P50431 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Shmt1P50431 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Shmt1P50431 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shmt1P50431 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shmt1P50431 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shmt1P50431 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shmt1P50431 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Shmt1P50431 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shmt1P50431 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shmt1P50431 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shmt1P50431 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shmt1P50431 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Shmt1P50431 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.84■□□□□ 0.45
Shmt1P50431 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.84■□□□□ 0.45
Shmt1P50431 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shmt1P50431 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shmt1P50431 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shmt1P50431 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shmt1P50431 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shmt1P50431 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Shmt1P50431 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shmt1P50431 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Shmt1P50431 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Shmt1P50431 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms