Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Nkx2-1P50220 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-1P50220 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.05□□□□□ -0.16
Nkx2-1P50220 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-1P50220 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-1P50220 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Nkx2-1P50220 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-1P50220 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.05□□□□□ -0.16
Nkx2-1P50220 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-1P50220 AC140264.2-202ENSMUST00000218746 817 ntBASIC14.05□□□□□ -0.16
Nkx2-1P50220 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-1P50220 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-1P50220 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-1P50220 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-1P50220 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-1P50220 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-1P50220 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-1P50220 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Nkx2-1P50220 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-1P50220 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Nkx2-1P50220 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.04□□□□□ -0.16
Nkx2-1P50220 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Gm7290-201ENSMUST00000104990 617 ntBASIC14.04□□□□□ -0.16
Nkx2-1P50220 Gm12918-201ENSMUST00000120234 636 ntBASIC14.04□□□□□ -0.16
Nkx2-1P50220 Gm15710-201ENSMUST00000121821 636 ntBASIC14.04□□□□□ -0.16
Nkx2-1P50220 Gm26571-201ENSMUST00000181399 666 ntBASIC14.04□□□□□ -0.16
Nkx2-1P50220 Gm5075-201ENSMUST00000196916 622 ntBASIC14.04□□□□□ -0.16
Nkx2-1P50220 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.04□□□□□ -0.16
Nkx2-1P50220 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.04□□□□□ -0.16
Nkx2-1P50220 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-1P50220 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-1P50220 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nkx2-1P50220 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nkx2-1P50220 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-1P50220 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.03□□□□□ -0.16
Nkx2-1P50220 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-1P50220 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-1P50220 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-1P50220 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-1P50220 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-1P50220 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.03□□□□□ -0.16
Nkx2-1P50220 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-1P50220 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-1P50220 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-1P50220 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.03□□□□□ -0.16
Nkx2-1P50220 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-1P50220 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-1P50220 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-1P50220 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nkx2-1P50220 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nkx2-1P50220 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-1P50220 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-1P50220 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-1P50220 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.02□□□□□ -0.16
Nkx2-1P50220 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.02□□□□□ -0.16
Nkx2-1P50220 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.02□□□□□ -0.16
Nkx2-1P50220 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-1P50220 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-1P50220 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-1P50220 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-1P50220 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-1P50220 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-1P50220 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nkx2-1P50220 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-1P50220 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-1P50220 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.02□□□□□ -0.17
Nkx2-1P50220 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-1P50220 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.02□□□□□ -0.17
Nkx2-1P50220 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nkx2-1P50220 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.01□□□□□ -0.17
Nkx2-1P50220 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.01□□□□□ -0.17
Nkx2-1P50220 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms