Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.3■□□□□ 0.04
Rfx3P48381 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rfx3P48381 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Rfx3P48381 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfx3P48381 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.3■□□□□ 0.04
Rfx3P48381 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.3■□□□□ 0.04
Rfx3P48381 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC15.3■□□□□ 0.04
Rfx3P48381 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfx3P48381 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfx3P48381 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfx3P48381 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.3■□□□□ 0.04
Rfx3P48381 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfx3P48381 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfx3P48381 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfx3P48381 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfx3P48381 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Rfx3P48381 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Rfx3P48381 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Rfx3P48381 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Rfx3P48381 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Rfx3P48381 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfx3P48381 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rfx3P48381 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfx3P48381 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfx3P48381 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfx3P48381 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.29■□□□□ 0.04
Rfx3P48381 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.29■□□□□ 0.04
Rfx3P48381 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Rfx3P48381 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.29■□□□□ 0.04
Rfx3P48381 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.29■□□□□ 0.04
Rfx3P48381 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfx3P48381 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rfx3P48381 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfx3P48381 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfx3P48381 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfx3P48381 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Rfx3P48381 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Rfx3P48381 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Rfx3P48381 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfx3P48381 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rfx3P48381 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfx3P48381 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfx3P48381 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.28■□□□□ 0.04
Rfx3P48381 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC15.28■□□□□ 0.04
Rfx3P48381 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfx3P48381 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.28■□□□□ 0.04
Rfx3P48381 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rfx3P48381 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rfx3P48381 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Rfx3P48381 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.28■□□□□ 0.04
Rfx3P48381 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfx3P48381 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfx3P48381 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Rfx3P48381 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rfx3P48381 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Rfx3P48381 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Rfx3P48381 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfx3P48381 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfx3P48381 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.27■□□□□ 0.04
Rfx3P48381 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.27■□□□□ 0.04
Rfx3P48381 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.27■□□□□ 0.04
Rfx3P48381 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.27■□□□□ 0.04
Rfx3P48381 Gm12382-201ENSMUST00000122005 922 ntBASIC15.27■□□□□ 0.04
Rfx3P48381 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Rfx3P48381 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC15.27■□□□□ 0.04
Rfx3P48381 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Rfx3P48381 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfx3P48381 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfx3P48381 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfx3P48381 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfx3P48381 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Rfx3P48381 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfx3P48381 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.27■□□□□ 0.03
Rfx3P48381 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfx3P48381 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.27■□□□□ 0.03
Rfx3P48381 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfx3P48381 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rfx3P48381 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfx3P48381 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfx3P48381 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfx3P48381 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Rfx3P48381 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfx3P48381 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfx3P48381 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Rfx3P48381 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx3P48381 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx3P48381 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx3P48381 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rfx3P48381 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Rfx3P48381 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx3P48381 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx3P48381 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx3P48381 Gm37292-201ENSMUST00000192062 758 ntBASIC15.26■□□□□ 0.03
Rfx3P48381 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC15.26■□□□□ 0.03
Rfx3P48381 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.26■□□□□ 0.03
Rfx3P48381 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx3P48381 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx3P48381 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx3P48381 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx3P48381 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms