Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps4bP46467 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps4bP46467 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps4bP46467 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Vps4bP46467 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Vps4bP46467 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Vps4bP46467 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Vps4bP46467 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Vps4bP46467 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Vps4bP46467 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Vps4bP46467 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.15■□□□□ 0.34
Vps4bP46467 Arhgef33-211ENSMUST00000225658 473 ntBASIC17.15■□□□□ 0.34
Vps4bP46467 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Vps4bP46467 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps4bP46467 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps4bP46467 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps4bP46467 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps4bP46467 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps4bP46467 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Vps4bP46467 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Vps4bP46467 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Vps4bP46467 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Vps4bP46467 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Vps4bP46467 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.14■□□□□ 0.33
Vps4bP46467 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Vps4bP46467 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Vps4bP46467 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps4bP46467 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.13■□□□□ 0.33
Vps4bP46467 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps4bP46467 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps4bP46467 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.13■□□□□ 0.33
Vps4bP46467 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps4bP46467 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Vps4bP46467 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps4bP46467 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Vps4bP46467 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.13■□□□□ 0.33
Vps4bP46467 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps4bP46467 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps4bP46467 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps4bP46467 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps4bP46467 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps4bP46467 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vps4bP46467 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps4bP46467 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Vps4bP46467 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.13■□□□□ 0.33
Vps4bP46467 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Vps4bP46467 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps4bP46467 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps4bP46467 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps4bP46467 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps4bP46467 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps4bP46467 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps4bP46467 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.12■□□□□ 0.33
Vps4bP46467 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.12■□□□□ 0.33
Vps4bP46467 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.12■□□□□ 0.33
Vps4bP46467 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.12■□□□□ 0.33
Vps4bP46467 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps4bP46467 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps4bP46467 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.12■□□□□ 0.33
Vps4bP46467 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps4bP46467 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.12■□□□□ 0.33
Vps4bP46467 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Vps4bP46467 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps4bP46467 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps4bP46467 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps4bP46467 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Vps4bP46467 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps4bP46467 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps4bP46467 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps4bP46467 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Vps4bP46467 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps4bP46467 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps4bP46467 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps4bP46467 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps4bP46467 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps4bP46467 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps4bP46467 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Vps4bP46467 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Vps4bP46467 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.11■□□□□ 0.33
Vps4bP46467 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Vps4bP46467 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Vps4bP46467 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms